Detailed information NTG1014654

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: JMW40_RS21775
• Genome accession: NZ_LR890603
• Coordinates: 4584096..4585121 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain MSB1_8G isolate MSB1_8G
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4579096..4590121

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JMW40_RS21755	metJ	4580157..4580474 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
JMW40_RS21760	yiiX	4580658..4581266 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
JMW40_RS21765	rpmE	4581327..4581539 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
JMW40_RS21770	priA	4581742..4583940 (+)	2199	WP_001333520.1	primosomal protein N'	Machinery gene
JMW40_RS21775	cytR	4584096..4585121 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
JMW40_RS21780	ftsN	4585213..4586172 (+)	960	WP_000068828.1	cell division protein FtsN	-
JMW40_RS21785	hslV	4586265..4586795 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
JMW40_RS21790	hslU	4586805..4588136 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
JMW40_RS21795	menA	4588203..4589129 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
JMW40_RS21800	rraA	4589222..4589707 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
JMW40_RS21805	zapB	4589792..4590037 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=1014654 JMW40_RS21775 WP_000644904.1 4584096..4585121(+) (cytR) [Escherichia coli strain MSB1_8G isolate MSB1_8G]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=1014654 JMW40_RS21775 WP_000644904.1 4584096..4585121(+) (cytR) [Escherichia coli strain MSB1_8G isolate MSB1_8G]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628