Detailed information NTG1014643

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ABV836_RS10265
• Genome accession: NZ_CP159579
• Coordinates: 2162048..2162749 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain Ab6-Co-2
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2157048..2167749

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABV836_RS10235 (ABV836_10235)	-	2157354..2157797 (-)	444	WP_001246675.1	SRPBCC family protein	-
ABV836_RS10240 (ABV836_10240)	tadA	2157867..2158370 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
ABV836_RS10245 (ABV836_10245)	-	2158377..2159501 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
ABV836_RS10250 (ABV836_10250)	ung	2159498..2160211 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
ABV836_RS10255 (ABV836_10255)	-	2160262..2160858 (-)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
ABV836_RS10260 (ABV836_10260)	gspK	2161089..2162048 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
ABV836_RS10265 (ABV836_10265)	xcpW	2162048..2162749 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ABV836_RS10270 (ABV836_10270)	xcpV	2162749..2163129 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
ABV836_RS10275 (ABV836_10275)	-	2163119..2163673 (-)	555	WP_000841373.1	type II secretion system protein	-
ABV836_RS10280 (ABV836_10280)	-	2163683..2164291 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ABV836_RS10285 (ABV836_10285)	-	2164329..2165102 (-)	774	WP_000497298.1	TatD family hydrolase	-
ABV836_RS10290 (ABV836_10290)	-	2165120..2165461 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
ABV836_RS10295 (ABV836_10295)	-	2165473..2166453 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
ABV836_RS10300 (ABV836_10300)	kdsB	2166465..2167226 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=1014643 ABV836_RS10265 WP_000594589.1 2162048..2162749(-) (xcpW) [Acinetobacter baumannii strain Ab6-Co-2]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=1014643 ABV836_RS10265 WP_000594589.1 2162048..2162749(-) (xcpW) [Acinetobacter baumannii strain Ab6-Co-2]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996