Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ABWX09_RS10135 | Genome accession | NZ_CP159518 |
| Coordinates | 2147897..2148277 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain NAB07B | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2142897..2153277
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABWX09_RS10105 (ABWX09_10105) | tadA | 2143015..2143518 (-) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
| ABWX09_RS10110 (ABWX09_10110) | - | 2143525..2144649 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ABWX09_RS10115 (ABWX09_10115) | ung | 2144646..2145359 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| ABWX09_RS10120 (ABWX09_10120) | - | 2145410..2146006 (-) | 597 | WP_000908452.1 | 6-carboxytetrahydropterin synthase | - |
| ABWX09_RS10125 (ABWX09_10125) | gspK | 2146237..2147196 (-) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| ABWX09_RS10130 (ABWX09_10130) | xcpW | 2147196..2147897 (-) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ABWX09_RS10135 (ABWX09_10135) | xcpV | 2147897..2148277 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ABWX09_RS10140 (ABWX09_10140) | - | 2148267..2148821 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| ABWX09_RS10145 (ABWX09_10145) | - | 2148831..2149439 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ABWX09_RS10150 (ABWX09_10150) | - | 2149477..2150250 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| ABWX09_RS10155 (ABWX09_10155) | - | 2150268..2150609 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| ABWX09_RS10160 (ABWX09_10160) | - | 2150621..2151601 (-) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| ABWX09_RS10165 (ABWX09_10165) | kdsB | 2151613..2152374 (-) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=1014091 ABWX09_RS10135 WP_000836911.1 2147897..2148277(-) (xcpV) [Acinetobacter baumannii strain NAB07B]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1014091 ABWX09_RS10135 WP_000836911.1 2147897..2148277(-) (xcpV) [Acinetobacter baumannii strain NAB07B]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |