Detailed information NTG1014028

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: JMW07_RS11780
• Genome accession: NZ_LR890334
• Coordinates: 2439242..2440447 (+)
• Length: 401 a.a.
• NCBI ID: WP_001161843.1
• Uniprot ID: -
• Organism: Escherichia coli strain MINF_9A isolate MINF_9A
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 2434242..2445447

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JMW07_RS11765	-	2434757..2436433 (+)	1677	WP_001301060.1	polysaccharide biosynthesis/export family protein	-
JMW07_RS11770	kdsB	2436443..2437183 (+)	741	WP_001596179.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
JMW07_RS11775	-	2437180..2439207 (+)	2028	WP_201519853.1	capsular polysaccharide biosynthesis protein	-
JMW07_RS11780	kpsS	2439242..2440447 (+)	1206	WP_001161843.1	capsular biosynthesis protein	Regulator
JMW07_RS11785	-	2440590..2441819 (-)	1230	WP_000575412.1	alpha-2,8-polysialyltransferase family protein	-
JMW07_RS11790	-	2441809..2442957 (-)	1149	WP_033867317.1	DUF6716 putative glycosyltransferase	-
JMW07_RS11795	neuC	2442950..2444125 (-)	1176	WP_023063599.1	UDP-N-acetylglucosamine 2-epimerase	-
JMW07_RS11800	-	2444122..2445378 (-)	1257	WP_023063598.1	GDSL-type esterase/lipase family protein	-

Sequence

Protein

• Length: 401 a.a.
• Molecular weight: 47841.16 Da
• Isoelectric Point: 10.1403

>NTDB_id=1014028 JMW07_RS11780 WP_001161843.1 2439242..2440447(+) (kpsS) [Escherichia coli strain MINF_9A isolate MINF_9A]
MQGNALTVLLSGKKYLLLQGPMGPFFNDVAEWLESLGRNAVNVVFNGGDRFYCRHRQYLAYYQTPKEFPGWLRDLHRQYD
FDTILCFGDCRPLHKEAKRWAKSKGIRFLAFEEGYLRPQFITVEEGGVNAYSSLPRDPDFYRKLPDMPTPHVENLKPSTM
KRIGHAMWYYLMGWHYRHEFPRYRHHKSFSPWYEARCWVRAYWRKQLYKVTQRKVLPRLMNELDQRYYLAVLQVYNDSQI
RNHSNYNDVRDYINEVMYSFSRKAPKESYLVIKHHPMDRGHRLYRPLIKRLSKEYGLGERVIYVHDLPMPELLRHAKAVV
TINSTAGISALIHNKPLKVMGNALYDIKGLTYQGHLHQFWQADFKPDMKLFKKFRGYLLMKTQVNAVYYGGNTKNRQHNT
Y

Nucleotide

• Length: 1206 bp

>NTDB_id=1014028 JMW07_RS11780 WP_001161843.1 2439242..2440447(+) (kpsS) [Escherichia coli strain MINF_9A isolate MINF_9A]
ATGCAAGGTAATGCACTAACCGTTTTATTATCCGGTAAAAAATATCTGCTATTGCAGGGGCCGATGGGACCTTTTTTCAA
TGACGTCGCCGAATGGTTAGAGTCATTAGGACGTAACGCTGTGAATGTTGTATTCAACGGTGGGGATCGTTTTTACTGCC
GCCATCGACAATACCTGGCTTACTACCAAACGCCGAAAGAGTTTCCCGGATGGTTACGGGATCTCCATCGGCAATATGAC
TTTGATACCATCCTCTGCTTTGGTGACTGCCGCCCATTGCACAAAGAAGCAAAACGCTGGGCAAAGTCGAAAGGGATCCG
CTTTCTGGCATTTGAGGAAGGATATTTACGCCCGCAATTTATTACCGTTGAAGAAGGCGGAGTGAACGCATATTCATCGC
TACCGCGCGATCCGGATTTTTATCGTAAGTTACCAGATATGCCTACGCCGCACGTTGAGAACTTAAAACCTTCAACGATG
AAACGTATAGGTCATGCGATGTGGTATTACCTGATGGGCTGGCATTACCGCCATGAGTTCCCTCGCTACCGCCACCATAA
ATCGTTTTCCCCCTGGTATGAAGCACGTTGCTGGGTTCGTGCATACTGGCGCAAGCAACTTTACAAGGTAACACAGCGTA
AGGTATTACCGAGGTTAATGAACGAGTTGGACCAGCGTTATTATCTTGCCGTTTTGCAGGTATATAACGATAGCCAGATT
CGTAACCACAGCAATTATAACGATGTGCGTGACTATATTAATGAAGTCATGTACTCATTTTCGCGTAAAGCGCCGAAAGA
AAGTTATTTGGTGATCAAACATCATCCGATGGATCGCGGTCACAGACTCTATCGACCATTAATTAAGCGGTTGAGTAAGG
AATATGGCTTAGGTGAGCGCGTCATTTATGTGCACGATCTCCCGATGCCGGAACTATTACGCCATGCTAAAGCGGTGGTG
ACGATTAACAGTACGGCGGGGATCTCTGCACTGATTCATAACAAACCACTCAAAGTGATGGGCAATGCCCTGTACGACAT
CAAGGGCTTGACGTATCAAGGGCATTTGCACCAGTTCTGGCAGGCCGATTTTAAACCAGATATGAAACTGTTTAAGAAGT
TTCGGGGGTATTTATTGATGAAGACCCAGGTTAATGCGGTTTATTATGGGGGGAACACAAAAAACCGCCAACATAATACA
TATTAA

Domains

Predicted by InterProScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (83-389)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	39.846	97.007	0.387