Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ABNK30_RS04740 Genome accession   NZ_CP159509
Coordinates   1056587..1056988 (+) Length   133 a.a.
NCBI ID   WP_005418455.1    Uniprot ID   -
Organism   Stenotrophomonas maltophilia strain SM911     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1051587..1061988
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABNK30_RS04725 tsaB 1053231..1053944 (+) 714 WP_049402513.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  ABNK30_RS04730 - 1054515..1055399 (-) 885 WP_111108631.1 energy transducer TonB -
  ABNK30_RS04735 gshB 1055399..1056346 (-) 948 WP_049404563.1 glutathione synthase -
  ABNK30_RS04740 pilG 1056587..1056988 (+) 402 WP_005418455.1 twitching motility response regulator PilG Regulator
  ABNK30_RS04745 - 1057007..1057369 (+) 363 WP_005410717.1 response regulator -
  ABNK30_RS04750 - 1057369..1057899 (+) 531 WP_005410716.1 chemotaxis protein CheW -
  ABNK30_RS04755 - 1057941..1059977 (+) 2037 WP_005410715.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14657.98 Da        Isoelectric Point: 6.3483

>NTDB_id=1013928 ABNK30_RS04740 WP_005418455.1 1056587..1056988(+) (pilG) [Stenotrophomonas maltophilia strain SM911]
MTENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=1013928 ABNK30_RS04740 WP_005418455.1 1056587..1056988(+) (pilG) [Stenotrophomonas maltophilia strain SM911]
ATGACTGAAAACACGACTGCGGGCGGGGAACTCGCAGGACTCCGGGTGATGGTCATCGATGATTCGAAGACCATCCGCAG
GACTGCGGAAACGCTGCTCAAGCGCGAAGGCTGCGAGGTGGTCACCGCCACCGACGGCTTCGAAGCGCTTGCGAAGATCG
CAGACCAGCAGCCGCAGATCATCTTCGTCGACATCATGATGCCGCGCCTGGACGGGTACCAGACCTGTGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCGACCCCGGTCATCATGCTCTCGTCCAAGGATGGCCTGTTCGACAAGGCGCGGGGACGCAT
CGTCGGCTCGGAGCAGTACCTGACGAAGCCTTTCACGCGTGAAGAACTGCTGGGTGCCATCCGCACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677

Multiple sequence alignment