Detailed information NTG1013716

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: JMW01_RS14285
• Genome accession: NZ_LR890270
• Coordinates: 3033999..3035024 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain MINF_7C isolate MINF_7C
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3028999..3040024

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JMW01_RS14255	zapB	3029083..3029328 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
JMW01_RS14260	rraA	3029413..3029898 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
JMW01_RS14265	menA	3029991..3030917 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
JMW01_RS14270	hslU	3030984..3032315 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
JMW01_RS14275	hslV	3032325..3032855 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
JMW01_RS14280	ftsN	3032948..3033907 (-)	960	WP_000068828.1	cell division protein FtsN	-
JMW01_RS14285	cytR	3033999..3035024 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
JMW01_RS14290	priA	3035180..3037378 (-)	2199	WP_001586520.1	primosomal protein N'	Machinery gene
JMW01_RS14295	rpmE	3037581..3037793 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
JMW01_RS14300	yiiX	3037854..3038462 (-)	609	WP_001577479.1	YiiX family permuted papain-like enzyme	-
JMW01_RS14305	metJ	3038522..3038839 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=1013716 JMW01_RS14285 WP_000644904.1 3033999..3035024(-) (cytR) [Escherichia coli strain MINF_7C isolate MINF_7C]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=1013716 JMW01_RS14285 WP_000644904.1 3033999..3035024(-) (cytR) [Escherichia coli strain MINF_7C isolate MINF_7C]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTTGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGTTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628