Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | PPH94_RS15555 | Genome accession | NZ_CP159409 |
| Coordinates | 3291763..3292917 (+) | Length | 384 a.a. |
| NCBI ID | WP_021163045.1 | Uniprot ID | U2H1M2 |
| Organism | Burkholderia cepacia strain SCCH90 Bcn202840 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3286763..3297917
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PPH94_RS15525 (PPH94_015525) | - | 3287404..3288009 (+) | 606 | WP_027789095.1 | 50S ribosomal protein L25/general stress protein Ctc | - |
| PPH94_RS15530 (PPH94_015530) | pth | 3288130..3288729 (+) | 600 | WP_021163050.1 | aminoacyl-tRNA hydrolase | - |
| PPH94_RS15535 (PPH94_015535) | hisC | 3288845..3289912 (+) | 1068 | WP_272546130.1 | histidinol-phosphate transaminase | - |
| PPH94_RS15540 (PPH94_015540) | - | 3289997..3290263 (-) | 267 | WP_006477774.1 | YfhL family 4Fe-4S dicluster ferredoxin | - |
| PPH94_RS15545 (PPH94_015545) | coaD | 3290323..3290820 (-) | 498 | WP_021163047.1 | pantetheine-phosphate adenylyltransferase | - |
| PPH94_RS15550 (PPH94_015550) | rsmD | 3290932..3291546 (-) | 615 | WP_272546129.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| PPH94_RS15555 (PPH94_015555) | pilA | 3291763..3292917 (+) | 1155 | WP_021163045.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| PPH94_RS15560 (PPH94_015560) | maiA | 3293001..3293645 (-) | 645 | WP_124532987.1 | maleylacetoacetate isomerase | - |
| PPH94_RS15565 (PPH94_015565) | ybiB | 3293840..3294814 (+) | 975 | WP_027789091.1 | DNA-binding protein YbiB | - |
| PPH94_RS15570 (PPH94_015570) | leuA | 3295195..3296841 (+) | 1647 | WP_060205926.1 | 2-isopropylmalate synthase | - |
| PPH94_RS15575 (PPH94_015575) | - | 3296984..3297367 (-) | 384 | WP_027789089.1 | nuclear transport factor 2 family protein | - |
Sequence
Protein
Download Length: 384 a.a. Molecular weight: 40898.82 Da Isoelectric Point: 4.8018
>NTDB_id=1013494 PPH94_RS15555 WP_021163045.1 3291763..3292917(+) (pilA) [Burkholderia cepacia strain SCCH90 Bcn202840]
MFSFFKRFKKTQEPDPAESQSADAQQTDEPSDAPAVEAPPAAEVPQAPAQPAAPAVVMTVTPTNDGRDEVVETVEIVPPP
LQDATAKKSWLARLKTGLAKTGSSITGVFVNTKIDEDLYEELETALLMSDAGVDATEYLLGALREKVRAGRLTDPQQVKA
ALHDLLVELLTPLEKSLMLGRAQPLVMMITGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAVWGERNNV
TVVQQESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVISKAHDGAPHEVLLVIDANTGQNALTQ
VKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAVEFADALLG
MFSFFKRFKKTQEPDPAESQSADAQQTDEPSDAPAVEAPPAAEVPQAPAQPAAPAVVMTVTPTNDGRDEVVETVEIVPPP
LQDATAKKSWLARLKTGLAKTGSSITGVFVNTKIDEDLYEELETALLMSDAGVDATEYLLGALREKVRAGRLTDPQQVKA
ALHDLLVELLTPLEKSLMLGRAQPLVMMITGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAVWGERNNV
TVVQQESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVISKAHDGAPHEVLLVIDANTGQNALTQ
VKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAVEFADALLG
Nucleotide
Download Length: 1155 bp
>NTDB_id=1013494 PPH94_RS15555 WP_021163045.1 3291763..3292917(+) (pilA) [Burkholderia cepacia strain SCCH90 Bcn202840]
ATGTTCAGCTTCTTCAAACGATTCAAGAAAACGCAGGAGCCCGATCCGGCGGAATCGCAATCGGCCGACGCGCAGCAAAC
GGACGAACCGTCCGATGCGCCCGCGGTCGAGGCCCCGCCTGCGGCCGAAGTGCCGCAAGCGCCCGCGCAACCGGCCGCGC
CGGCCGTCGTGATGACGGTCACGCCGACCAACGACGGGCGCGACGAAGTCGTCGAGACGGTCGAAATCGTTCCGCCGCCG
CTGCAGGACGCCACCGCGAAGAAATCGTGGCTCGCCCGCCTGAAAACGGGGCTCGCCAAGACGGGCTCGAGCATCACCGG
CGTCTTCGTCAACACGAAGATCGACGAGGATCTGTACGAGGAGCTCGAAACCGCGCTGCTGATGTCCGACGCGGGCGTCG
ACGCGACCGAGTACCTGCTCGGCGCGCTACGCGAAAAGGTGCGCGCGGGCCGCCTGACCGACCCGCAGCAGGTGAAGGCC
GCGCTGCACGACCTGCTCGTCGAGTTGCTGACGCCGCTCGAGAAGTCGCTGATGCTCGGCCGCGCGCAGCCGCTCGTGAT
GATGATCACCGGCGTGAACGGTGCGGGCAAGACGACCAGCATCGGCAAGCTCGCAAAGCATCTGCAGAGCTTCGACCAGT
CGGTGCTGCTGGCCGCGGGCGACACGTTCCGCGCGGCCGCGCGCGAACAGCTGGCGGTCTGGGGCGAGCGCAACAACGTG
ACGGTCGTGCAGCAGGAAAGCGGCGATCCGGCCGCGGTGATCTTCGACGCGGTCAGCGCCGCGCGCGCGCGCAAGATCGA
CGTGATGATGGCCGACACGGCCGGCCGCCTGCCGACGCAGCTCCACCTGATGGAAGAGCTGAAGAAGGTGAAGCGCGTGA
TCTCGAAGGCGCACGACGGCGCGCCGCACGAAGTGCTGCTGGTGATCGACGCGAACACCGGCCAGAACGCGCTCACGCAG
GTCAAGGCATTCGACGACGCGCTCGGCCTCACCGGCCTCATCGTCACGAAGCTCGACGGTACCGCGAAGGGCGGGATTCT
CGCCGCGATCGCGCGGCAGCGCCCGGTGCCGGTCTACTTCATCGGCGTCGGCGAGAAGGTCGAGGATCTGCAGCCGTTCA
GCGCGGTCGAATTCGCGGACGCGCTGCTCGGCTGA
ATGTTCAGCTTCTTCAAACGATTCAAGAAAACGCAGGAGCCCGATCCGGCGGAATCGCAATCGGCCGACGCGCAGCAAAC
GGACGAACCGTCCGATGCGCCCGCGGTCGAGGCCCCGCCTGCGGCCGAAGTGCCGCAAGCGCCCGCGCAACCGGCCGCGC
CGGCCGTCGTGATGACGGTCACGCCGACCAACGACGGGCGCGACGAAGTCGTCGAGACGGTCGAAATCGTTCCGCCGCCG
CTGCAGGACGCCACCGCGAAGAAATCGTGGCTCGCCCGCCTGAAAACGGGGCTCGCCAAGACGGGCTCGAGCATCACCGG
CGTCTTCGTCAACACGAAGATCGACGAGGATCTGTACGAGGAGCTCGAAACCGCGCTGCTGATGTCCGACGCGGGCGTCG
ACGCGACCGAGTACCTGCTCGGCGCGCTACGCGAAAAGGTGCGCGCGGGCCGCCTGACCGACCCGCAGCAGGTGAAGGCC
GCGCTGCACGACCTGCTCGTCGAGTTGCTGACGCCGCTCGAGAAGTCGCTGATGCTCGGCCGCGCGCAGCCGCTCGTGAT
GATGATCACCGGCGTGAACGGTGCGGGCAAGACGACCAGCATCGGCAAGCTCGCAAAGCATCTGCAGAGCTTCGACCAGT
CGGTGCTGCTGGCCGCGGGCGACACGTTCCGCGCGGCCGCGCGCGAACAGCTGGCGGTCTGGGGCGAGCGCAACAACGTG
ACGGTCGTGCAGCAGGAAAGCGGCGATCCGGCCGCGGTGATCTTCGACGCGGTCAGCGCCGCGCGCGCGCGCAAGATCGA
CGTGATGATGGCCGACACGGCCGGCCGCCTGCCGACGCAGCTCCACCTGATGGAAGAGCTGAAGAAGGTGAAGCGCGTGA
TCTCGAAGGCGCACGACGGCGCGCCGCACGAAGTGCTGCTGGTGATCGACGCGAACACCGGCCAGAACGCGCTCACGCAG
GTCAAGGCATTCGACGACGCGCTCGGCCTCACCGGCCTCATCGTCACGAAGCTCGACGGTACCGCGAAGGGCGGGATTCT
CGCCGCGATCGCGCGGCAGCGCCCGGTGCCGGTCTACTTCATCGGCGTCGGCGAGAAGGTCGAGGATCTGCAGCCGTTCA
GCGCGGTCGAATTCGCGGACGCGCTGCTCGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
53.846 |
100 |
0.583 |