Detailed information NTG1013377

Bioinformatically predicted

Overview

• Name: addB
• Type: Machinery gene
• Locus tag: ABVJ71_RS06645
• Genome accession: NZ_CP159358
• Coordinates: 1270682..1274191 (-)
• Length: 1169 a.a.
• NCBI ID: WP_353856184.1
• Uniprot ID: -
• Organism: Bacillus sp. Bos-x628
• Function: homologous recombination; plasmid transformation (predicted from homology) Homologous recombination

Genomic Context

Location: 1265682..1279191

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABVJ71_RS06635	sbcD	1265798..1266973 (-)	1176	WP_353856182.1	exonuclease subunit SbcD	-
ABVJ71_RS06640	addA	1267000..1270704 (-)	3705	WP_353856183.1	helicase-exonuclease AddAB subunit AddA	Machinery gene
ABVJ71_RS06645	addB	1270682..1274191 (-)	3510	WP_353856184.1	helicase-exonuclease AddAB subunit AddB	Machinery gene
ABVJ71_RS06650	-	1274364..1274810 (+)	447	WP_353856185.1	ferritin-like domain-containing protein	-
ABVJ71_RS06655	-	1275009..1275419 (-)	411	WP_353856186.1	DoxX family protein	-
ABVJ71_RS06660	-	1275477..1276316 (-)	840	WP_353856187.1	M56 family metallopeptidase	-
ABVJ71_RS06665	-	1276309..1276731 (-)	423	WP_353856188.1	BlaI/MecI/CopY family transcriptional regulator	-
ABVJ71_RS06670	-	1277026..1278168 (+)	1143	WP_353856590.1	AbrB family transcriptional regulator	-
ABVJ71_RS06675	lepB	1278207..1278716 (-)	510	WP_353856189.1	signal peptidase I	-

Sequence

Protein

• Length: 1169 a.a.
• Molecular weight: 135002.35 Da
• Isoelectric Point: 5.6053

>NTDB_id=1013377 ABVJ71_RS06645 WP_353856184.1 1270682..1274191(-) (addB) [Bacillus sp. Bos-x628]
MEIQFLAGRSGSGKTTAIVEEIKEQLRLDPLGHPIIFLVPDQMTFLMEYELAKTSEAGGMIRAKVFSFTRLAWSILQQTG
GANRQFVTSTGIQMLLRKVIEEHKESFKVFKKASDKPGFVEQIEKTMAEFKRYCMMPEDVERIATSSIHSEYTEERRAAE
KLHDLHILYKQIEQHLQGEYVHSEDYLTLLAQQIPLSEELKTAHIYIDGFYQFTPQQLQVVEQLLLHTKKITAAFTVDRS
YHDTQPNELDLFRMTGKTYFQLYQLAKKCGADISEQVLEKNKRHIHAHDLAYIESKYEQRPLQPYQEKTPHITVSRSANK
RAEIEGVARDILDLVREKDLRLRDISIIARHLDDYKDTLKEVFRDYDIPFFIDGNESMQYHPLIELIRSSLDIIKGNWRY
EAVFRCVKTEFLFPLELAKNKAREQADQLENYCIAYGVKGERWTNGSRFHYRRFHSLDEDFGQTDQEIEMEQMLNEAKEW
IVPPLFQLQKRLKKAQKVREKVEAIYLFLEEVQVPEKLEKARLEAEKAGRLAEAMQHGQVWDAVIQLMNEFVEMLGDEEL
SLPLFQQMMDTGLASLKFALIPPSLDQVFIGSMDLSRMYQVKCTFIIGVNDGVIPARPSDESVLSEDDREWLKRAGAELA
DTGKERLLDEQFLIYQALSSPSHYLFLSYPVADAEGRSLLPSTFIKYCQELMPNHQNALYVLDPEQLEEQDQLKFVVNEP
VALSYTVSQLQQWLNHYPISDVWWSVYNYLMTSPSRDISKNIISSLFFTNRAKPLTENVTKELYGDHIQGSVSRMEKFNA
CAFSHFASHGLKLKERQFYKLEAPDIGQLFHSALKHISDTLIEQKKDWKNLTKEDCVTYSKYAIEQLAPRLQQEILLSSN
RHAYIKEKLQKILIRVSSILSEHAKVSAFSPVGLELGFGGQGPLPPITFQLKNGCTMELVGRIDRVDKAEGSKGLLLRIV
DYKSSDRGLDLAEVYYGLALQMLTYLDLTITYSKEWLGMEATPAGILYFHIHDPLIQAPIPLAEDEIEQEIFKKFKMKGF
LLENVEAVKLMDQTLETGKSQVIQAGLKKDGSFRSDSAVLSEDQFQILTKHVRRTFEEAGERITNGEVDINPYKLKDQTP
CRFCSFKSICQFDESIEDNEFRVLTSEKDEVMLERIKKEGDQYANSKTE

Nucleotide

• Length: 3510 bp

>NTDB_id=1013377 ABVJ71_RS06645 WP_353856184.1 1270682..1274191(-) (addB) [Bacillus sp. Bos-x628]
GTGGAGATTCAGTTTTTAGCAGGCAGATCGGGGAGTGGAAAAACGACTGCGATAGTAGAAGAGATCAAAGAACAATTACG
GCTTGATCCATTGGGTCATCCGATCATTTTTTTAGTCCCGGATCAAATGACATTTTTAATGGAATATGAGCTTGCAAAAA
CGTCTGAAGCTGGCGGAATGATCAGAGCTAAAGTATTTAGTTTTACTCGTCTCGCTTGGTCTATTTTACAGCAGACTGGC
GGAGCGAACAGGCAATTTGTCACGAGTACCGGAATCCAAATGCTTTTAAGAAAAGTGATTGAGGAGCATAAAGAAAGCTT
TAAAGTGTTTAAAAAGGCGAGTGATAAGCCAGGGTTTGTTGAGCAAATAGAAAAGACGATGGCTGAATTCAAAAGATACT
GCATGATGCCAGAAGATGTAGAAAGAATTGCAACATCTAGCATTCATTCCGAATATACAGAAGAAAGGCGAGCAGCCGAA
AAACTGCATGATCTGCATATTCTTTATAAGCAGATTGAACAGCATTTGCAGGGTGAATATGTACACTCTGAAGACTATTT
GACCCTTCTCGCGCAGCAAATCCCTTTATCTGAAGAGCTGAAAACGGCACATATTTATATAGATGGTTTTTATCAATTTA
CACCACAGCAGCTTCAAGTCGTTGAGCAGCTTCTGCTACATACAAAAAAAATAACGGCTGCCTTCACGGTTGATCGGTCA
TATCACGACACACAGCCAAACGAACTTGATTTATTTCGGATGACAGGTAAAACGTATTTTCAACTTTATCAGCTTGCCAA
AAAGTGCGGAGCTGACATTTCTGAACAAGTATTAGAGAAGAATAAGCGTCATATCCATGCACATGATCTTGCCTATATAG
AGAGTAAGTACGAGCAAAGACCGCTGCAGCCGTATCAAGAGAAAACGCCTCATATCACGGTGTCCAGAAGTGCAAATAAA
CGAGCCGAAATTGAGGGTGTTGCGAGAGACATTCTTGATTTAGTGAGAGAAAAGGATTTGAGATTACGCGATATCTCAAT
TATTGCAAGACATTTAGATGACTATAAAGATACATTGAAAGAGGTTTTTCGTGATTATGACATTCCTTTTTTTATTGATG
GAAATGAATCAATGCAATATCATCCCCTCATTGAATTGATTCGTTCTAGTTTGGATATCATCAAAGGGAATTGGCGGTAT
GAAGCAGTATTTCGCTGTGTGAAAACAGAATTCCTATTCCCGCTTGAGCTTGCAAAAAATAAAGCGAGAGAACAGGCAGA
TCAGCTTGAAAATTATTGCATTGCATATGGTGTGAAAGGTGAACGCTGGACAAACGGTTCCCGCTTTCATTATCGAAGAT
TTCACTCGCTGGATGAAGATTTTGGACAAACAGATCAAGAAATTGAAATGGAACAAATGTTGAATGAGGCAAAAGAATGG
ATTGTTCCTCCTCTTTTCCAACTGCAAAAAAGACTGAAAAAAGCGCAAAAAGTCAGGGAAAAGGTTGAAGCTATTTATTT
ATTTCTTGAGGAAGTGCAAGTGCCAGAGAAGCTTGAAAAAGCAAGATTAGAGGCCGAGAAAGCGGGGAGATTAGCTGAAG
CGATGCAGCATGGACAAGTATGGGATGCTGTTATTCAATTAATGAATGAATTTGTTGAAATGTTAGGCGACGAGGAGCTT
TCACTCCCTTTATTTCAGCAGATGATGGATACTGGCTTGGCATCTTTAAAGTTTGCTTTAATTCCGCCATCACTTGATCA
AGTGTTTATCGGAAGTATGGATTTATCTAGAATGTATCAAGTGAAGTGTACGTTTATCATTGGAGTAAATGATGGTGTAA
TTCCTGCACGTCCTTCTGATGAAAGTGTATTGTCTGAGGATGACCGCGAATGGCTAAAGCGTGCAGGAGCAGAGCTGGCA
GATACAGGAAAGGAACGGCTGCTAGATGAGCAATTTTTAATTTACCAAGCATTATCAAGTCCATCTCATTATTTGTTTCT
TTCATATCCGGTGGCAGATGCTGAGGGACGCTCTCTATTGCCCTCGACCTTCATTAAGTACTGCCAAGAGCTTATGCCAA
ACCATCAAAATGCATTGTATGTGCTTGACCCAGAACAGTTAGAGGAGCAGGACCAATTAAAGTTTGTAGTCAATGAGCCT
GTCGCATTGTCCTATACTGTTTCGCAGCTTCAGCAATGGCTCAATCACTATCCCATCAGCGATGTGTGGTGGAGTGTATA
TAATTATTTAATGACATCACCATCACGTGATATCTCAAAGAACATCATTTCAAGCTTGTTTTTTACAAATAGAGCCAAGC
CTTTAACGGAAAATGTGACAAAAGAGCTTTATGGTGATCATATACAAGGCAGTGTTTCAAGAATGGAGAAATTTAATGCG
TGTGCTTTTTCTCATTTTGCTTCACACGGTTTGAAACTAAAGGAAAGACAATTTTATAAATTGGAGGCACCTGATATAGG
TCAGCTTTTTCACTCTGCATTAAAACACATTTCAGATACGCTCATTGAACAAAAAAAAGATTGGAAAAACTTGACGAAAG
AAGACTGTGTCACCTATTCAAAATATGCGATTGAACAGCTTGCACCTCGTCTGCAACAAGAGATTTTATTAAGCTCTAAT
CGGCATGCTTATATAAAAGAAAAACTCCAGAAAATCCTGATAAGAGTTTCTTCTATACTAAGCGAGCATGCCAAAGTGAG
TGCATTTTCTCCAGTGGGACTTGAGTTAGGCTTTGGAGGTCAAGGTCCTCTGCCTCCGATCACCTTTCAATTAAAGAACG
GTTGTACCATGGAGCTTGTTGGAAGAATTGACCGAGTTGATAAAGCGGAAGGTTCTAAAGGTTTGCTTTTGAGAATTGTA
GACTACAAGTCAAGTGATAGAGGACTTGATCTAGCAGAGGTTTACTATGGTTTGGCATTGCAAATGCTGACTTATTTAGA
CTTGACGATTACTTATTCTAAAGAGTGGCTTGGAATGGAGGCGACACCGGCAGGTATTTTATACTTCCATATTCATGATC
CGCTCATTCAAGCCCCGATTCCGTTAGCAGAGGATGAAATCGAGCAGGAAATATTTAAGAAATTTAAAATGAAAGGTTTC
TTGCTTGAAAATGTAGAGGCAGTTAAGCTCATGGATCAGACACTTGAAACAGGGAAATCACAAGTCATTCAAGCCGGTTT
GAAAAAGGATGGTTCTTTCCGTTCTGATTCTGCTGTTTTAAGTGAGGACCAATTTCAAATACTCACAAAGCATGTTCGCC
GTACTTTTGAAGAAGCAGGGGAAAGAATTACGAATGGTGAAGTGGATATTAATCCATATAAACTTAAGGATCAGACTCCT
TGCCGATTTTGTTCGTTTAAGTCTATTTGCCAGTTCGATGAATCAATAGAGGATAACGAATTCCGAGTACTTACTTCTGA
GAAAGATGAAGTCATGTTAGAGCGGATCAAAAAAGAAGGGGATCAGTATGCAAATTCCAAAACCGAATAA

Domains

Predicted by InterproScan.

• PD-(D/E)XK nuclease superfamily (PDDEXK_1) (790-1131)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
addB	Bacillus subtilis subsp. subtilis str. 168	65.952	99.743	0.658