Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   ABVJ71_RS05265 Genome accession   NZ_CP159358
Coordinates   1007288..1007863 (-) Length   191 a.a.
NCBI ID   WP_353855940.1    Uniprot ID   -
Organism   Bacillus sp. Bos-x628     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1002288..1012863
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABVJ71_RS05235 - 1002324..1002815 (-) 492 WP_353855936.1 molybdenum cofactor biosynthesis protein MoaE -
  ABVJ71_RS05240 mobB 1002815..1003333 (-) 519 WP_353855937.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  ABVJ71_RS05245 glp 1003315..1004592 (-) 1278 WP_353855938.1 gephyrin-like molybdotransferase Glp -
  ABVJ71_RS05250 - 1004602..1005618 (-) 1017 WP_353856566.1 MoeB/ThiF family adenylyltransferase -
  ABVJ71_RS05255 - 1005808..1006197 (-) 390 Protein_1046 molybdenum cofactor guanylyltransferase -
  ABVJ71_RS05260 - 1006313..1007251 (+) 939 WP_353855939.1 sigmaE regulated sporulation protein -
  ABVJ71_RS05265 rok 1007288..1007863 (-) 576 WP_353855940.1 hypothetical protein Regulator
  ABVJ71_RS05270 - 1008352..1008810 (-) 459 WP_353855941.1 TlpA disulfide reductase family protein -
  ABVJ71_RS05275 ahpA 1008893..1009435 (-) 543 WP_353855942.1 biofilm-specific peroxidase AhpA -
  ABVJ71_RS05280 - 1009708..1010505 (+) 798 WP_353855943.1 mechanosensitive ion channel family protein -
  ABVJ71_RS05285 - 1010536..1010778 (-) 243 WP_353856567.1 YkuS family protein -
  ABVJ71_RS05290 - 1010829..1011959 (-) 1131 WP_353855944.1 N-acetyldiaminopimelate deacetylase -
  ABVJ71_RS05295 dapD 1012041..1012751 (-) 711 WP_353855945.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21688.66 Da        Isoelectric Point: 9.7728

>NTDB_id=1013365 ABVJ71_RS05265 WP_353855940.1 1007288..1007863(-) (rok) [Bacillus sp. Bos-x628]
MFNEREALRLRLEQLNEAEVKVIREYQIERDTIYAKLRELDRQGTGLVTDTKKEMRSDKKTDSLPVLAELAAQEVRSFQQ
QQTQSNATSPLGTGQLNGAPVGIPEGSRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTT
FMQSLIKMYPEVKKPYRGQYILEGDIQTEEE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=1013365 ABVJ71_RS05265 WP_353855940.1 1007288..1007863(-) (rok) [Bacillus sp. Bos-x628]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAACGAAGCAGAAGTGAAGGTCATTCGTGAATATCA
AATTGAACGTGATACCATTTATGCGAAGTTAAGAGAATTAGACCGTCAAGGAACAGGTCTTGTAACAGATACAAAAAAAG
AGATGCGTTCTGATAAAAAAACGGATTCACTGCCTGTATTAGCAGAGTTGGCTGCACAAGAAGTGAGAAGCTTTCAACAA
CAACAGACACAGTCAAACGCTACATCACCTTTAGGAACAGGTCAGCTTAATGGTGCACCTGTAGGTATTCCTGAAGGATC
AAGACGCAGAAGAGGAACGGCTCGTCCAGGTTCAAAGGCAGCTAAACTTCGTGAAGCAGCGATCAAAACATTAAAGCGTC
ATAATGCGGCCATTAAAAGCTCTGAGCTTCAAAAAGAAATTGAAAAAGAGAGCGGACTTGAAATTCCGAATATGACAACG
TTTATGCAAAGTTTAATTAAAATGTACCCAGAAGTGAAAAAGCCTTATCGCGGACAGTATATTTTAGAAGGCGACATTCA
AACAGAAGAGGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

74.869

100

0.749

Multiple sequence alignment