Detailed information NTG1013351

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: ABVJ71_RS00470
• Genome accession: NZ_CP159358
• Coordinates: 96467..98851 (+)
• Length: 794 a.a.
• NCBI ID: WP_353855109.1
• Uniprot ID: -
• Organism: Bacillus sp. Bos-x628
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 91467..103851

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABVJ71_RS00445	-	91468..92733 (-)	1266	WP_353855104.1	replication-associated recombination protein A	-
ABVJ71_RS00450	-	92938..93357 (+)	420	WP_353855105.1	Rrf2 family transcriptional regulator	-
ABVJ71_RS00455	-	93376..94518 (+)	1143	WP_353855106.1	cysteine desulfurase family protein	-
ABVJ71_RS00460	mnmA	94613..95731 (+)	1119	WP_353855107.1	tRNA 2-thiouridine(34) synthase MnmA	-
ABVJ71_RS00465	-	95794..96447 (+)	654	WP_353855108.1	tetratricopeptide repeat protein	-
ABVJ71_RS00470	recD2	96467..98851 (+)	2385	WP_353855109.1	ATP-dependent RecD-like DNA helicase	Machinery gene
ABVJ71_RS00475	-	99036..99554 (+)	519	WP_353855110.1	PRC-barrel domain-containing protein	-
ABVJ71_RS00480	-	99568..99759 (+)	192	WP_003216308.1	hypothetical protein	-
ABVJ71_RS00485	-	99780..99911 (+)	132	WP_353855111.1	YrzQ family protein	-
ABVJ71_RS00490	-	99948..100598 (-)	651	WP_353855112.1	amino acid ABC transporter permease	-
ABVJ71_RS00495	-	100614..101267 (-)	654	WP_353855113.1	amino acid ABC transporter permease	-
ABVJ71_RS00500	-	101345..102145 (-)	801	WP_353856488.1	transporter substrate-binding domain-containing protein	-
ABVJ71_RS00505	-	102168..102896 (-)	729	WP_353855114.1	amino acid ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 88984.59 Da
• Isoelectric Point: 5.3910

>NTDB_id=1013351 ABVJ71_RS00470 WP_353855109.1 96467..98851(+) (recD2) [Bacillus sp. Bos-x628]
MQENPDQMKLDDEPFLKGTVQAVIFHNESNLYSVLKVKVIETSEDLEEKTASVTGYFPALHENETYTFYGKVTSHPKFGE
QFQATHFEKEVPTTKQGIIHYLSSDLFEGIGKKTAEDIVGQLGNQTLHKIMRDPAVLYEVPRLSKKKADKLAAALQQHQG
LEQIMIHLNQYGFGPQLSMKIYQVYEGETLQKIKENPYQLVKDVEGIGFIKADELGARTGISGNDPARIRAALLYTVETA
CLKDGHTYIQTKDLIVETRKLLNQTGNDNKVTEMDVANQILALGEGKDMIIEDDRCYHPSLFYAEQSVAKRIQKIVSQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPSDYKKDE
SFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEDQPIEGKLVIIDESSMLDIWLANHLFKAIPDQIQVI
MVGDEHQLPSVGPGQVLRDLLASNVVPAVTLTDIYRQADGSTIVELAHDMKNGVLPKNIAARSKDRSFIQCTADQLKEVI
EKVVLNAAQKGYTAKDIQVLAPMYKGKAGINELNKMLQHILNPKKPKGREISFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYEKENTEKEDMVVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKYLILCGEESALEWGVKNNEDSLRQTSLTMRLVNTEKVMDAELEALQKELPFSVHDANIGMEGITPFDFMHD

Nucleotide

• Length: 2385 bp

>NTDB_id=1013351 ABVJ71_RS00470 WP_353855109.1 96467..98851(+) (recD2) [Bacillus sp. Bos-x628]
GTGCAGGAAAATCCAGATCAAATGAAGCTTGATGATGAGCCATTTCTAAAAGGCACAGTGCAAGCTGTTATTTTTCATAA
TGAAAGCAATTTATATTCGGTATTAAAAGTGAAAGTCATTGAGACATCAGAAGACTTAGAGGAAAAAACGGCATCTGTCA
CAGGCTACTTCCCTGCACTTCATGAGAACGAAACGTACACCTTTTATGGAAAAGTCACGAGCCATCCGAAATTCGGCGAA
CAGTTTCAGGCGACTCATTTTGAAAAAGAGGTGCCAACAACGAAACAAGGAATTATTCATTACCTCTCCAGTGACTTATT
TGAAGGGATAGGGAAGAAAACAGCAGAAGACATTGTGGGTCAGCTAGGTAATCAAACGCTTCATAAAATTATGCGTGACC
CAGCTGTTTTGTATGAGGTTCCACGCCTATCAAAAAAGAAAGCCGATAAGCTTGCTGCTGCGCTTCAACAGCATCAAGGA
CTGGAGCAAATCATGATCCATCTAAATCAGTATGGCTTTGGTCCACAGTTGAGTATGAAAATTTACCAAGTGTATGAAGG
CGAAACCCTGCAAAAAATTAAAGAAAATCCTTATCAACTTGTGAAAGATGTAGAGGGAATCGGATTTATTAAAGCAGATG
AGCTAGGGGCAAGAACGGGCATTTCCGGAAATGATCCGGCTCGAATTCGTGCAGCACTTCTTTATACAGTAGAGACTGCC
TGCCTGAAAGACGGCCATACTTACATCCAAACAAAAGATCTCATTGTTGAAACGAGAAAGTTGCTCAACCAAACAGGGAA
TGATAACAAAGTCACGGAGATGGATGTAGCCAATCAAATACTCGCACTCGGTGAAGGGAAAGATATGATAATTGAAGATG
ACAGGTGCTATCATCCTTCTTTGTTTTATGCAGAGCAGAGTGTGGCAAAACGAATTCAAAAAATCGTATCCCAAACCGAA
TATGCAGATCAATTTCCTGAATCAGAATTCCTCCTTGCACTTGGTGAATTGGAGGAACGTTTAGGTGTACAGTATGCTCC
TACACAAAAAGAAGCCATCCAAAAAGCGCTCATGTCACCTATGCTGCTTTTAACGGGCGGACCAGGGACAGGAAAAACAA
CGGTGATTAAAGGAATCGTTGAGCTGTATAGCGATCTGCACGGCGTATCGCTTGATCCAAGTGATTACAAAAAGGATGAA
TCGTTTCCATTTGTCCTAGCGGCTCCAACGGGACGGGCAGCCAAACGAATGACCGAATCAACAGGGCTTCCGGCAGTGAC
CATCCACAGGCTGCTTGGCTGGAATGGGTCTGAAGGCTTTTCGCACGATGAGGATCAGCCAATTGAAGGGAAACTTGTCA
TCATAGATGAATCGAGCATGTTGGATATTTGGCTTGCAAACCACTTATTCAAAGCGATCCCTGATCAGATTCAAGTCATT
ATGGTGGGGGATGAACACCAGCTTCCATCTGTTGGCCCAGGACAAGTATTAAGAGATTTACTAGCATCAAATGTCGTACC
TGCTGTCACCTTAACAGATATTTACCGGCAGGCAGACGGCTCGACCATTGTTGAGCTAGCTCATGATATGAAAAATGGTG
TTCTACCAAAAAATATAGCTGCACGATCAAAAGATCGATCCTTTATTCAATGTACAGCAGATCAATTGAAAGAAGTCATT
GAAAAGGTTGTCCTAAACGCAGCTCAAAAAGGCTATACGGCGAAAGATATTCAAGTGTTGGCCCCTATGTATAAAGGAAA
AGCCGGCATCAATGAGCTAAATAAAATGCTTCAGCATATTTTGAACCCTAAAAAACCAAAGGGTAGGGAAATCTCCTTTG
GTGATGTTGTGTACCGGACGGGGGATAAGGTGCTTCAGCTTGTGAATCAGCCGGAGAATAACATTTTCAATGGTGACATT
GGCGAAATTGTCTCGATTTTTTACGAAAAAGAAAATACGGAAAAAGAAGACATGGTCGTCATATCATTTGATGGGAATGA
AATCACCTTTACGAAAAAAGATTTTCATCAGTTTACACATGCTTATTGCTGCTCCATTCACAAATCACAGGGCAGTGAGT
TTCCGATCGTTGTGCTACCAGTGGTCAGAAGCTATTATCGAATGCTTCGACGAAATTTGTTGTACACAGCCATTACACGA
AGCAAAAAGTATTTGATTCTGTGCGGTGAAGAATCAGCACTGGAATGGGGCGTCAAAAATAATGAAGATTCCCTTCGACA
AACGTCATTAACGATGAGACTTGTAAACACCGAAAAGGTGATGGATGCTGAACTTGAAGCACTTCAAAAAGAACTTCCGT
TTAGCGTACATGATGCAAATATCGGAATGGAGGGAATTACCCCATTTGATTTTATGCATGACTAA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (345-553)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

• Helix-hairpin-helix domain (HHH_5) (108-156)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-660)

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	78.491	100	0.786