Detailed information NTG1013314

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: JL014_RS22770
• Genome accession: NZ_LR883006
• Coordinates: 4699237..4700262 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli isolate L5_E1779_ETEC
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4694237..4705262

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JL014_RS22760 (ETECE1779_05183)	rpmE	4696468..4696680 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
JL014_RS22765 (ETECE1779_05184)	priA	4696883..4699081 (+)	2199	WP_001298972.1	primosomal protein N'	Machinery gene
JL014_RS22770 (ETECE1779_05185)	cytR	4699237..4700262 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
JL014_RS22775 (ETECE1779_05186)	ftsN	4700354..4701313 (+)	960	WP_000068834.1	cell division protein FtsN	-
JL014_RS22780 (ETECE1779_05187)	hslV	4701406..4701936 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
JL014_RS22785 (ETECE1779_05188)	hslU	4701946..4703277 (+)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
JL014_RS22790 (ETECE1779_05189)	menA	4703344..4704270 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
JL014_RS22795 (ETECE1779_05190)	rraA	4704363..4704848 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
JL014_RS22800 (ETECE1779_05191)	zapB	4704933..4705178 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=1013314 JL014_RS22770 WP_000644904.1 4699237..4700262(+) (cytR) [Escherichia coli isolate L5_E1779_ETEC]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=1013314 JL014_RS22770 WP_000644904.1 4699237..4700262(+) (cytR) [Escherichia coli isolate L5_E1779_ETEC]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAACCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTCGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628