Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   N027_RS23545 Genome accession   NZ_CP159278
Coordinates   5353208..5353618 (-) Length   136 a.a.
NCBI ID   WP_002551738.1    Uniprot ID   A0AAT9SFQ2
Organism   Pseudomonas syringae USA007     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5348208..5358618
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N027_RS23530 (N027_23530) - 5350156..5352198 (-) 2043 WP_024658101.1 methyl-accepting chemotaxis protein -
  N027_RS23535 (N027_23535) - 5352242..5352781 (-) 540 WP_024658100.1 chemotaxis protein CheW -
  N027_RS23540 (N027_23540) pilH 5352796..5353161 (-) 366 WP_003377196.1 twitching motility response regulator PilH -
  N027_RS23545 (N027_23545) pilG 5353208..5353618 (-) 411 WP_002551738.1 twitching motility response regulator PilG Regulator
  N027_RS23550 (N027_23550) gshB 5353863..5354822 (+) 960 WP_024658099.1 glutathione synthase -
  N027_RS23555 (N027_23555) - 5355074..5355976 (+) 903 WP_005736950.1 energy transducer TonB -
  N027_RS23560 (N027_23560) - 5356052..5356624 (+) 573 WP_003377203.1 YqgE/AlgH family protein -
  N027_RS23565 (N027_23565) ruvX 5356624..5357064 (+) 441 WP_003377205.1 Holliday junction resolvase RuvX -
  N027_RS23570 (N027_23570) pyrR 5357322..5357834 (+) 513 WP_024658098.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 14943.42 Da        Isoelectric Point: 8.5283

>NTDB_id=1013023 N027_RS23545 WP_002551738.1 5353208..5353618(-) (pilG) [Pseudomonas syringae USA007]
MEQHASALKVMVIDDSKTIRRTAETLLKNAGCEVITAIDGFDALAKIADNHPRIIFVDIMMPRLDGYQTCALIKNNRAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLSAIKAHVPGFVAAEQHIS

Nucleotide


Download         Length: 411 bp        

>NTDB_id=1013023 N027_RS23545 WP_002551738.1 5353208..5353618(-) (pilG) [Pseudomonas syringae USA007]
ATGGAACAACACGCCTCTGCATTGAAAGTCATGGTCATCGATGACTCGAAGACCATCCGCCGCACCGCCGAAACGCTGCT
TAAAAACGCAGGCTGCGAAGTCATCACTGCGATAGACGGTTTTGACGCGCTGGCCAAGATTGCCGATAACCACCCGCGAA
TCATATTCGTCGATATCATGATGCCGCGCCTGGATGGCTATCAGACGTGCGCGCTGATCAAGAACAACCGTGCATTCAAG
TCCACGCCGGTCATTATGCTGTCCTCCAAGGACGGTCTATTCGACAAGGCCAAGGGGCGAATCGTCGGTTCCGATCAGTT
TTTGACAAAGCCTTTCAGCAAGGAAGAACTGCTCAGCGCGATCAAGGCTCATGTGCCGGGCTTCGTTGCAGCAGAACAAC
ACATATCGTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

91.912

0.691

Multiple sequence alignment