Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ABVN19_RS20700 Genome accession   NZ_CP159259
Coordinates   4461456..4461866 (-) Length   136 a.a.
NCBI ID   WP_028945580.1    Uniprot ID   -
Organism   Pseudomonas vranovensis strain MYb188     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4456456..4466866
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABVN19_RS20685 (ABVN19_20685) - 4458433..4460478 (-) 2046 WP_028945583.1 methyl-accepting chemotaxis protein -
  ABVN19_RS20690 (ABVN19_20690) - 4460494..4461048 (-) 555 WP_105642365.1 chemotaxis protein CheW -
  ABVN19_RS20695 (ABVN19_20695) pilH 4461045..4461410 (-) 366 WP_028945581.1 twitching motility response regulator PilH -
  ABVN19_RS20700 (ABVN19_20700) pilG 4461456..4461866 (-) 411 WP_028945580.1 twitching motility response regulator PilG Regulator
  ABVN19_RS20705 (ABVN19_20705) gshB 4462161..4463114 (+) 954 WP_028945579.1 glutathione synthase -
  ABVN19_RS20710 (ABVN19_20710) - 4463224..4464129 (+) 906 WP_028945578.1 energy transducer TonB -
  ABVN19_RS20715 (ABVN19_20715) - 4464183..4464752 (+) 570 WP_105642366.1 YqgE/AlgH family protein -
  ABVN19_RS20720 (ABVN19_20720) ruvX 4464749..4465186 (+) 438 WP_167332140.1 Holliday junction resolvase RuvX -
  ABVN19_RS20725 (ABVN19_20725) pyrR 4465247..4465765 (+) 519 WP_105642367.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  ABVN19_RS20730 (ABVN19_20730) - 4465778..4466782 (+) 1005 WP_028945574.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 14924.18 Da        Isoelectric Point: 5.5984

>NTDB_id=1012967 ABVN19_RS20700 WP_028945580.1 4461456..4461866(-) (pilG) [Pseudomonas vranovensis strain MYb188]
MEQSGAALKVMVIDDSKTIRRTAQMLLSEAGCEVITATDGFDALAKIVDQHPQIIFVDVLMPRLDGYQTCALIKHNSVFK
DTPVILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIRAHVPGFAAEEQHAP

Nucleotide


Download         Length: 411 bp        

>NTDB_id=1012967 ABVN19_RS20700 WP_028945580.1 4461456..4461866(-) (pilG) [Pseudomonas vranovensis strain MYb188]
ATGGAACAGTCCGGTGCGGCACTGAAGGTGATGGTGATCGATGACTCAAAGACGATTCGCCGAACCGCCCAGATGTTGCT
CAGTGAAGCAGGGTGCGAGGTCATCACGGCCACCGACGGGTTCGACGCCCTGGCCAAGATTGTCGACCAGCATCCGCAGA
TCATTTTCGTCGACGTGCTGATGCCGCGTCTGGATGGCTACCAGACCTGCGCCCTGATCAAACACAACAGCGTCTTCAAG
GACACGCCGGTGATTCTGCTGTCGTCCCGCGACGGCCTGTTCGACAAGGCCAGGGGCCGCGTGGTCGGCTCCGATCAATT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGGATGCAATCCGCGCGCATGTGCCCGGGTTCGCCGCAGAAGAACAAC
ACGCACCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

69.6

91.912

0.64

Multiple sequence alignment