Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ABVN21_RS25020 Genome accession   NZ_CP159258
Coordinates   5531793..5532197 (+) Length   134 a.a.
NCBI ID   WP_034147542.1    Uniprot ID   A0AAU8E172
Organism   Pseudomonas sp. MYb327     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5526793..5537197
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABVN21_RS24995 (ABVN21_24995) pyrR 5527775..5528278 (-) 504 WP_034147547.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  ABVN21_RS25000 (ABVN21_25000) ruvX 5528373..5528810 (-) 438 WP_034147546.1 Holliday junction resolvase RuvX -
  ABVN21_RS25005 (ABVN21_25005) - 5528810..5529382 (-) 573 WP_034147545.1 YqgE/AlgH family protein -
  ABVN21_RS25010 (ABVN21_25010) - 5529547..5530446 (-) 900 WP_339556713.1 energy transducer TonB -
  ABVN21_RS25015 (ABVN21_25015) gshB 5530511..5531464 (-) 954 WP_339556712.1 glutathione synthase -
  ABVN21_RS25020 (ABVN21_25020) pilG 5531793..5532197 (+) 405 WP_034147542.1 twitching motility response regulator PilG Regulator
  ABVN21_RS25025 (ABVN21_25025) pilH 5532258..5532623 (+) 366 WP_008068134.1 twitching motility response regulator PilH -
  ABVN21_RS25030 (ABVN21_25030) - 5532634..5533167 (+) 534 WP_339556711.1 chemotaxis protein CheW -
  ABVN21_RS25035 (ABVN21_25035) - 5533343..5535376 (+) 2034 WP_339556714.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14576.99 Da        Isoelectric Point: 7.1342

>NTDB_id=1012945 ABVN21_RS25020 WP_034147542.1 5531793..5532197(+) (pilG) [Pseudomonas sp. MYb327]
MDQQPSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIADNHPGIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLNAIQAHVPGFAAVLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=1012945 ABVN21_RS25020 WP_034147542.1 5531793..5532197(+) (pilG) [Pseudomonas sp. MYb327]
ATGGACCAGCAACCCAGCGCCTTGAAGGTCATGGTGATCGACGATTCGAAGACGATTCGCCGCACCGCCGAAACGCTGCT
CAAGAACGTGGGATGTGAGGTCATTACGGCCATCGACGGTTTCGATGCCCTGGCCAAAATTGCCGACAATCACCCCGGCA
TCATCTTCGTCGACATCATGATGCCGCGTCTGGATGGCTATCAGACATGCGCTTTAATCAAGAACAACAGTGCATTCAAG
TCCACGCCAGTGATTATGCTGTCGTCCAAGGACGGGCTGTTTGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTT
TCTGACCAAGCCTTTCAGCAAGGAAGAACTGCTCAACGCGATCCAGGCCCATGTTCCGGGCTTCGCCGCTGTTTTGCCGC
AGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

78.814

88.06

0.694

Multiple sequence alignment