Detailed information NTG1012910

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: JLZ81_RS21810
• Genome accession: NZ_LR882973
• Coordinates: 4484797..4485822 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli isolate L2_E1649
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4479797..4490822

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JLZ81_RS21790 (ETECE1649_04445)	metJ	4480858..4481175 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
JLZ81_RS21795 (ETECE1649_04446)	yiiX	4481359..4481967 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
JLZ81_RS21800 (ETECE1649_04447)	rpmE	4482028..4482240 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
JLZ81_RS21805 (ETECE1649_04448)	priA	4482443..4484641 (+)	2199	WP_001355569.1	primosomal protein N'	Machinery gene
JLZ81_RS21810 (ETECE1649_04449)	cytR	4484797..4485822 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
JLZ81_RS21815 (ETECE1649_04450)	ftsN	4485914..4486873 (+)	960	WP_000068828.1	cell division protein FtsN	-
JLZ81_RS21820 (ETECE1649_04451)	hslV	4486966..4487496 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
JLZ81_RS21825 (ETECE1649_04452)	hslU	4487506..4488837 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
JLZ81_RS21830 (ETECE1649_04453)	menA	4488904..4489830 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
JLZ81_RS21835 (ETECE1649_04454)	rraA	4489923..4490408 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
JLZ81_RS21840 (ETECE1649_04455)	zapB	4490493..4490738 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=1012910 JLZ81_RS21810 WP_000644904.1 4484797..4485822(+) (cytR) [Escherichia coli isolate L2_E1649]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=1012910 JLZ81_RS21810 WP_000644904.1 4484797..4485822(+) (cytR) [Escherichia coli isolate L2_E1649]
GTGAAAGCGAAGAAGCAGGAAACGGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628