NTDB

Overview

Name	clpC	Type	Regulator
Locus tag	HPOKI154_RS01365	Genome accession	NZ_CP006823
Coordinates	265807..268377 (+)	Length	856 a.a.
NCBI ID	WP_025222508.1	Uniprot ID	-
Organism	Helicobacter pylori oki154
Function	degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 260807..273377

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPOKI154_RS01340 (HPOKI154_01420)	xseA	261043..262305 (+)	1263	WP_025313650.1	exodeoxyribonuclease VII large subunit	-
HPOKI154_RS01345 (HPOKI154_01425)	-	262323..263477 (-)	1155	WP_025222504.1	DNA methyltransferase	-
HPOKI154_RS01350 (HPOKI154_01430)	-	263492..264103 (-)	612	WP_025366728.1	hypothetical protein	-
HPOKI154_RS01355 (HPOKI154_01435)	-	264283..264971 (+)	689	Protein_262	BsaWI family type II restriction enzyme	-
HPOKI154_RS01360 (HPOKI154_01440)	-	264968..265733 (+)	766	Protein_263	DNA-methyltransferase	-
HPOKI154_RS01365 (HPOKI154_01445)	clpC	265807..268377 (+)	2571	WP_025222508.1	ATP-dependent Clp protease ATP-binding subunit	Regulator
HPOKI154_RS01370 (HPOKI154_01450)	-	268433..269152 (+)	720	WP_025222509.1	cytochrome c biogenesis protein CcdA	-
HPOKI154_RS01375 (HPOKI154_01455)	-	269162..270298 (+)	1137	WP_025313654.1	amidohydrolase family protein	-
HPOKI154_RS01380 (HPOKI154_01460)	mqnF	270283..271512 (+)	1230	WP_025366729.1	aminofutalosine deaminase	-
HPOKI154_RS01385 (HPOKI154_01465)	-	271573..271815 (+)	243	WP_000780041.1	nuclease	-
HPOKI154_RS01390 (HPOKI154_01470)	miaB	271825..273138 (+)	1314	WP_025366730.1	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	-

Sequence

Protein

Download Length: 856 a.a. Molecular weight: 96606.43 Da Isoelectric Point: 6.3261

                                >NTDB_id=101253 HPOKI154_RS01365 WP_025222508.1 265807..268377(+) (clpC) [Helicobacter pylori oki154]

MNLFEKMTDQLHETLDSALALALHHKNAEVTPLHMLFVMLNNSQGILIQALQKMSVDIQALRLSVQSELNKFAKVSQINK

QNIQLNQALIQSLENAQGLMAKTGDSFIATDVYLLANMSLFESVLKPYLDTKELQKTLEALRKGATIQDKNDDSNWESLE

KFGIDLTQKALENKLDPVIGRDEEIIRMMQILIRKTKNNPILLGEPGVGKTAVVEGLAQRIVNKEVPKTLLNKRVVALDL

SLLVAGAKYRGEFEERLKKVIEEVKKSANVILFIDEIHTIVGAGASEGGMDAANILKPALARGELHTIGATTMKEYRKYF

EKDMALQRRFQPILLNEPSINEALQILRGLKETLETHHNITINDSALIASAKLSSRYITDRFLPDKAIDLIDEGAAQLKM

QMESEPAKLSSVKRSIQRLEMEKQALEMEKKESNAKRMQEILKELSDLKEEKIQLEAQFENEKEVFREISRLKMEAESLK

KEAERFKRNGDYQQAGEIEYSKIPENKKKEEELQHKWEAMQQNGALLQNALTENNIAEIVSQWTHIPVQKMLQSEKNRVL

NIESELQKRVVGQEKAIKAIAKAIKRNKAGLSDSNKPIGSFLFLGPTGVGKTESAKALAQFLFDSDKNLIRIDMSEYMEK

HAISRLIGAAPGYVGYEEGGQLTEAVRRKPYSVVLLDEVEKAHPDVFNLLLQVLDEGHLTDSKGVRVDFKNTILILTSNV

ASGVLLEENLSEADKQKAIKESLRQFFKPEFLNRLDEIISFNALDSHAIANIVGILFENIQKKALERGINITLNEEAKEL

IAKAGFDRFYGARPLKRALYEMVEDKLAELILEDKIKENDSVAFVVENNEIVPKIK

Nucleotide

Download Length: 2571 bp

                                >NTDB_id=101253 HPOKI154_RS01365 WP_025222508.1 265807..268377(+) (clpC) [Helicobacter pylori oki154]

ATGAATTTATTTGAAAAAATGACCGACCAATTGCATGAGACTTTAGACAGCGCGCTCGCTTTAGCTTTACACCATAAAAA

CGCTGAAGTAACGCCCTTGCACATGCTTTTTGTCATGCTCAATAACTCCCAAGGCATCCTCATTCAAGCCTTACAAAAAA

TGTCTGTGGATATTCAAGCCTTAAGGCTTAGCGTTCAAAGCGAGTTGAATAAATTTGCTAAAGTTTCACAAATCAACAAG

CAAAATATCCAATTAAACCAGGCTCTAATCCAAAGTTTAGAGAACGCTCAAGGCTTGATGGCTAAAACGGGCGATTCTTT

CATCGCTACAGATGTGTATCTTTTGGCGAACATGAGCCTTTTTGAAAGCGTTCTAAAACCTTATTTAGACACTAAAGAAT

TGCAAAAAACTTTAGAGGCTTTGAGGAAGGGCGCGACTATCCAAGATAAAAACGATGATTCTAATTGGGAAAGTTTGGAA

AAATTTGGCATTGATTTGACGCAAAAAGCCTTAGAAAATAAGCTCGATCCGGTGATTGGGAGGGATGAAGAAATCATTCG

CATGATGCAAATTTTGATAAGAAAAACAAAAAATAACCCTATTTTATTGGGTGAGCCTGGAGTGGGGAAAACGGCGGTTG

TGGAGGGTTTGGCCCAACGCATTGTGAATAAGGAAGTGCCTAAAACGCTTTTAAACAAACGAGTCGTCGCTTTAGATTTA

AGCTTATTGGTGGCTGGAGCGAAATACAGAGGCGAGTTTGAAGAGCGCTTGAAAAAGGTGATTGAAGAAGTTAAAAAAAG

CGCGAATGTGATTTTATTCATTGATGAAATCCACACGATCGTAGGGGCTGGGGCTAGTGAGGGGGGCATGGATGCGGCTA

ATATTTTAAAACCTGCACTCGCTAGGGGGGAGTTGCACACGATTGGAGCGACTACCATGAAAGAATACCGCAAGTATTTT

GAAAAAGACATGGCGTTACAAAGGCGTTTCCAACCCATTTTACTCAATGAGCCTAGCATCAATGAAGCTTTACAGATTTT

AAGGGGGTTAAAAGAAACTTTAGAAACGCACCATAATATCACCATCAATGACTCTGCGCTCATAGCGAGCGCCAAACTCT

CTAGCCGTTATATCACCGATAGGTTTTTACCCGATAAAGCGATTGACTTGATTGATGAGGGGGCGGCCCAATTAAAAATG

CAAATGGAATCCGAGCCGGCAAAGCTCTCTAGCGTTAAGCGCTCCATTCAAAGATTAGAAATGGAAAAACAAGCCCTTGA

AATGGAAAAAAAAGAGAGCAATGCCAAACGCATGCAAGAAATCCTTAAAGAATTGAGCGATTTGAAAGAAGAAAAAATCC

AATTAGAAGCGCAATTTGAAAACGAAAAAGAAGTGTTTAGAGAAATTTCACGCTTGAAAATGGAAGCGGAAAGCTTGAAA

AAAGAGGCTGAGAGGTTTAAGCGCAATGGGGATTACCAGCAAGCGGGTGAAATTGAATACTCTAAAATCCCTGAAAATAA

AAAGAAAGAAGAAGAATTGCAGCACAAATGGGAAGCGATGCAACAAAACGGGGCGTTATTGCAAAACGCTTTAACCGAAA

ACAACATCGCTGAGATCGTGAGCCAATGGACGCACATTCCGGTCCAAAAAATGCTCCAGAGCGAAAAAAATAGGGTTTTA

AACATTGAAAGCGAATTGCAAAAAAGAGTGGTGGGGCAAGAAAAAGCAATCAAAGCGATCGCTAAAGCGATTAAAAGGAA

TAAAGCCGGGCTTAGCGATAGCAATAAACCCATAGGGAGTTTTCTCTTTTTAGGGCCAACGGGCGTAGGTAAAACCGAGA

GCGCTAAAGCTTTGGCGCAATTCTTGTTTGATAGCGATAAGAATCTTATAAGAATTGACATGAGCGAATACATGGAAAAA

CATGCCATAAGCCGTCTTATTGGAGCCGCTCCTGGGTATGTGGGCTATGAAGAAGGCGGGCAACTGACCGAAGCGGTGCG

CAGAAAACCCTATAGCGTGGTGCTGTTAGATGAAGTGGAAAAAGCCCATCCGGATGTGTTTAATCTTTTGTTGCAGGTTT

TAGATGAAGGGCATTTAACCGATAGTAAGGGCGTGAGGGTGGATTTCAAAAACACGATTTTGATTTTAACCAGCAATGTG

GCTAGCGGCGTGCTTTTAGAAGAAAATTTGAGTGAAGCCGATAAACAAAAAGCGATTAAAGAGAGTTTGAGGCAATTCTT

CAAGCCGGAATTTTTAAACCGCTTAGATGAAATCATCTCCTTTAACGCCCTAGATAGCCATGCTATCGCTAATATCGTGG

GGATTCTCTTTGAAAACATTCAAAAAAAAGCGCTTGAAAGAGGCATTAATATAACCCTAAACGAAGAGGCAAAAGAATTG

ATCGCTAAAGCGGGATTTGACAGATTTTATGGCGCTAGACCCCTAAAGCGCGCACTCTATGAAATGGTAGAAGATAAGCT

CGCTGAACTCATTTTAGAGGATAAAATTAAAGAGAATGACAGCGTGGCGTTTGTGGTAGAAAATAACGAAATTGTGCCTA

AGATTAAGTGA