Detailed information NTG1012272

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: IEU92_RS19865
• Genome accession: NZ_LR881938
• Coordinates: 4106923..4107948 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli str. K-12 substr. MG1655 strain K-12
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4101923..4112948

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IEU92_RS19835	zapB	4102007..4102252 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
IEU92_RS19840	rraA	4102337..4102822 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
IEU92_RS19845	menA	4102915..4103841 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
IEU92_RS19850	hslU	4103908..4105239 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
IEU92_RS19855	hslV	4105249..4105779 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
IEU92_RS19860	ftsN	4105872..4106831 (-)	960	WP_000068828.1	cell division protein FtsN	-
IEU92_RS19865	cytR	4106923..4107948 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
IEU92_RS19870	priA	4108104..4110302 (-)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
IEU92_RS19875	rpmE	4110505..4110717 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
IEU92_RS19880	yiiX	4110778..4111386 (-)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
IEU92_RS19885	metJ	4111570..4111887 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=1012272 IEU92_RS19865 WP_000644904.1 4106923..4107948(-) (cytR) [Escherichia coli str. K-12 substr. MG1655 strain K-12]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=1012272 IEU92_RS19865 WP_000644904.1 4106923..4107948(-) (cytR) [Escherichia coli str. K-12 substr. MG1655 strain K-12]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628