Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | ABNQ24_RS16700 | Genome accession | NZ_CP158968 |
| Coordinates | 3476122..3477258 (+) | Length | 378 a.a. |
| NCBI ID | WP_058907461.1 | Uniprot ID | A0A454TW93 |
| Organism | Ralstonia pseudosolanacearum strain EN1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3471122..3482258
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABNQ24_RS16675 (ABNQ24_16640) | - | 3471484..3471732 (-) | 249 | WP_011000353.1 | YfhL family 4Fe-4S dicluster ferredoxin | - |
| ABNQ24_RS16680 (ABNQ24_16645) | coaD | 3471783..3472289 (-) | 507 | WP_003262550.1 | pantetheine-phosphate adenylyltransferase | - |
| ABNQ24_RS16685 (ABNQ24_16650) | rsmD | 3472485..3473132 (-) | 648 | WP_016724254.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| ABNQ24_RS16690 (ABNQ24_16655) | - | 3473213..3474556 (-) | 1344 | WP_089190479.1 | pitrilysin family protein | - |
| ABNQ24_RS16695 (ABNQ24_16660) | - | 3474556..3476061 (-) | 1506 | WP_011000350.1 | pitrilysin family protein | - |
| ABNQ24_RS16700 (ABNQ24_16665) | pilA | 3476122..3477258 (+) | 1137 | WP_058907461.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| ABNQ24_RS16705 (ABNQ24_16670) | - | 3477255..3477893 (-) | 639 | WP_058907460.1 | LysE/ArgO family amino acid transporter | - |
| ABNQ24_RS16710 (ABNQ24_16675) | maiA | 3477890..3478540 (-) | 651 | WP_058907459.1 | maleylacetoacetate isomerase | - |
| ABNQ24_RS16715 (ABNQ24_16680) | - | 3478544..3479245 (-) | 702 | WP_011000346.1 | fumarylacetoacetate hydrolase family protein | - |
| ABNQ24_RS16720 (ABNQ24_16685) | - | 3479393..3480019 (+) | 627 | WP_038938076.1 | ANTAR domain-containing response regulator | - |
| ABNQ24_RS16725 (ABNQ24_16690) | - | 3480296..3481558 (+) | 1263 | WP_011000344.1 | CmpA/NrtA family ABC transporter substrate-binding protein | - |
Sequence
Protein
Download Length: 378 a.a. Molecular weight: 40070.29 Da Isoelectric Point: 5.8101
>NTDB_id=1012109 ABNQ24_RS16700 WP_058907461.1 3476122..3477258(+) (pilA) [Ralstonia pseudosolanacearum strain EN1]
MFSFWKKRKAEPQPAAEPAPPAAPEAAQAPAPAPAPVAAPVPTPAPAPVAVPDTPAAPAALDMQADDIETVPTPPVVEQA
RKGWMSRLRSGLSKTSKSLTTLFVGVKVDEALFEELETALLMADAGVDATEYLLDELRRRVKAQRIETAEGVKTALRDLL
IELLHPLEKTMVLGRDQPTVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVLLAAGDTFRAAAREQLVIWGQRNNVTVVAQE
SGDPAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVRRVIGKAMATAPHETLLVIDANTGQNALAQVKAFDD
ALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEQVEDLQPFSAREFADALLG
MFSFWKKRKAEPQPAAEPAPPAAPEAAQAPAPAPAPVAAPVPTPAPAPVAVPDTPAAPAALDMQADDIETVPTPPVVEQA
RKGWMSRLRSGLSKTSKSLTTLFVGVKVDEALFEELETALLMADAGVDATEYLLDELRRRVKAQRIETAEGVKTALRDLL
IELLHPLEKTMVLGRDQPTVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVLLAAGDTFRAAAREQLVIWGQRNNVTVVAQE
SGDPAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVRRVIGKAMATAPHETLLVIDANTGQNALAQVKAFDD
ALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEQVEDLQPFSAREFADALLG
Nucleotide
Download Length: 1137 bp
>NTDB_id=1012109 ABNQ24_RS16700 WP_058907461.1 3476122..3477258(+) (pilA) [Ralstonia pseudosolanacearum strain EN1]
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCAGAGCCCCAGCCGGCTGCCGAACCGGCGCCGCCCGCCGCGCCCGAAGCCGC
ACAGGCTCCTGCTCCTGCCCCGGCCCCGGTTGCCGCCCCCGTCCCCACGCCGGCTCCCGCCCCGGTCGCCGTGCCGGATA
CGCCGGCCGCGCCGGCTGCGCTGGACATGCAGGCCGATGACATCGAGACCGTGCCGACGCCGCCCGTGGTGGAGCAGGCG
CGCAAAGGCTGGATGTCGCGCCTGCGCTCGGGCCTGTCGAAGACCAGCAAGAGCCTGACCACGCTGTTCGTCGGCGTGAA
GGTGGACGAGGCGCTGTTCGAGGAGCTGGAGACCGCGCTGCTGATGGCCGATGCCGGCGTCGATGCCACCGAGTACCTGC
TGGACGAACTGCGCCGCCGCGTGAAGGCCCAGCGCATCGAGACCGCCGAGGGCGTGAAGACCGCGCTGCGCGACCTGCTC
ATCGAGCTGCTGCATCCGCTCGAAAAGACCATGGTGCTCGGCCGCGACCAGCCGACGGTGATCATGATCGCGGGCGTCAA
CGGCGCCGGCAAGACCACCAGCATCGGCAAGCTGTGCAAGCACTTCCAGACCTATGGACAGTCCGTGCTGCTGGCCGCCG
GCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTGGTGATCTGGGGCCAGCGCAACAACGTGACCGTGGTGGCGCAGGAA
TCGGGCGACCCGGCCGCCGTGATCTTCGACGCGGTGAACGCGGCGCGCGCCCGCGGCATCGACATCGTCATGGCCGACAC
CGCCGGCCGCCTGCCGACCCAGCTGCACCTGATGGAAGAGCTGAAGAAGGTGCGCCGCGTGATCGGCAAAGCGATGGCGA
CCGCGCCGCACGAGACCCTGCTGGTGATCGACGCCAACACCGGCCAGAACGCGCTGGCGCAGGTGAAAGCCTTCGACGAT
GCGCTCGGCCTGACCGGCCTGATCGTCACCAAGCTGGACGGCACCGCCAAGGGCGGCATCCTGGCCGCCATCGCGCGGCA
GCGGCCGGTGCCGGTATATTTCATCGGCGTGGGCGAGCAGGTGGAAGACCTGCAGCCGTTCTCCGCGCGCGAATTCGCCG
ACGCGCTGCTGGGCTAA
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCAGAGCCCCAGCCGGCTGCCGAACCGGCGCCGCCCGCCGCGCCCGAAGCCGC
ACAGGCTCCTGCTCCTGCCCCGGCCCCGGTTGCCGCCCCCGTCCCCACGCCGGCTCCCGCCCCGGTCGCCGTGCCGGATA
CGCCGGCCGCGCCGGCTGCGCTGGACATGCAGGCCGATGACATCGAGACCGTGCCGACGCCGCCCGTGGTGGAGCAGGCG
CGCAAAGGCTGGATGTCGCGCCTGCGCTCGGGCCTGTCGAAGACCAGCAAGAGCCTGACCACGCTGTTCGTCGGCGTGAA
GGTGGACGAGGCGCTGTTCGAGGAGCTGGAGACCGCGCTGCTGATGGCCGATGCCGGCGTCGATGCCACCGAGTACCTGC
TGGACGAACTGCGCCGCCGCGTGAAGGCCCAGCGCATCGAGACCGCCGAGGGCGTGAAGACCGCGCTGCGCGACCTGCTC
ATCGAGCTGCTGCATCCGCTCGAAAAGACCATGGTGCTCGGCCGCGACCAGCCGACGGTGATCATGATCGCGGGCGTCAA
CGGCGCCGGCAAGACCACCAGCATCGGCAAGCTGTGCAAGCACTTCCAGACCTATGGACAGTCCGTGCTGCTGGCCGCCG
GCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTGGTGATCTGGGGCCAGCGCAACAACGTGACCGTGGTGGCGCAGGAA
TCGGGCGACCCGGCCGCCGTGATCTTCGACGCGGTGAACGCGGCGCGCGCCCGCGGCATCGACATCGTCATGGCCGACAC
CGCCGGCCGCCTGCCGACCCAGCTGCACCTGATGGAAGAGCTGAAGAAGGTGCGCCGCGTGATCGGCAAAGCGATGGCGA
CCGCGCCGCACGAGACCCTGCTGGTGATCGACGCCAACACCGGCCAGAACGCGCTGGCGCAGGTGAAAGCCTTCGACGAT
GCGCTCGGCCTGACCGGCCTGATCGTCACCAAGCTGGACGGCACCGCCAAGGGCGGCATCCTGGCCGCCATCGCGCGGCA
GCGGCCGGTGCCGGTATATTTCATCGGCGTGGGCGAGCAGGTGGAAGACCTGCAGCCGTTCTCCGCGCGCGAATTCGCCG
ACGCGCTGCTGGGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
52.163 |
100 |
0.574 |