Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   ABUL70_RS12850 Genome accession   NZ_CP158703
Coordinates   1370343..1370519 (+) Length   58 a.a.
NCBI ID   WP_001986215.1    Uniprot ID   A0A9W5QJV7
Organism   Bacillus thuringiensis strain HD-1     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1365343..1375519
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABUL70_RS12830 (ABUL70_12840) clpC 1365674..1368274 (+) 2601 WP_000365401.1 ATP-dependent chaperone ClpB Regulator
  ABUL70_RS12835 (ABUL70_12845) - 1368313..1368495 (-) 183 WP_001211116.1 YjzD family protein -
  ABUL70_RS12840 (ABUL70_12850) - 1368652..1369386 (+) 735 WP_000028691.1 hydrolase -
  ABUL70_RS12845 (ABUL70_12855) - 1369416..1370288 (+) 873 WP_000487722.1 NAD-dependent epimerase/dehydratase family protein -
  ABUL70_RS12850 (ABUL70_12860) comZ 1370343..1370519 (+) 177 WP_001986215.1 ComZ family protein Regulator
  ABUL70_RS12855 (ABUL70_12865) fabH 1371057..1371989 (+) 933 WP_001100533.1 beta-ketoacyl-ACP synthase III -
  ABUL70_RS12860 (ABUL70_12870) fabF 1372021..1373259 (+) 1239 WP_000412656.1 beta-ketoacyl-ACP synthase II -
  ABUL70_RS12865 (ABUL70_12875) - 1373366..1374154 (+) 789 WP_000513275.1 DUF2268 domain-containing protein -
  ABUL70_RS12870 (ABUL70_12880) - 1374298..1375044 (+) 747 WP_000966128.1 YjbA family protein -
  ABUL70_RS12875 - 1375067..1375192 (-) 126 WP_000386957.1 hypothetical protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.74 Da        Isoelectric Point: 4.4797

>NTDB_id=1012045 ABUL70_RS12850 WP_001986215.1 1370343..1370519(+) (comZ) [Bacillus thuringiensis strain HD-1]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=1012045 ABUL70_RS12850 WP_001986215.1 1370343..1370519(+) (comZ) [Bacillus thuringiensis strain HD-1]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATCGCAATGAAGCATTTACCGGAAGCAAAGGCAATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAGGCACAGCCGGTGTTAGAGTTGTTAATGAAAGTTATGAACGAAGCTTACGAGCTTGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment