Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | ABUL70_RS07675 | Genome accession | NZ_CP158703 |
| Coordinates | 415100..415378 (+) | Length | 92 a.a. |
| NCBI ID | WP_000799098.1 | Uniprot ID | A0A9W5VHK7 |
| Organism | Bacillus thuringiensis strain HD-1 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 407435..454761 | 415100..415378 | within | 0 |
Gene organization within MGE regions
Location: 407435..454761
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABUL70_RS07615 (ABUL70_07645) | - | 407435..408559 (-) | 1125 | WP_000679465.1 | tyrosine-type recombinase/integrase | - |
| ABUL70_RS07620 (ABUL70_07650) | - | 408718..409581 (-) | 864 | WP_000703672.1 | hypothetical protein | - |
| ABUL70_RS07625 (ABUL70_07655) | - | 410143..411282 (+) | 1140 | WP_000838797.1 | AimR family lysis-lysogeny pheromone receptor | - |
| ABUL70_RS07630 (ABUL70_07660) | - | 411654..411776 (+) | 123 | WP_000237930.1 | hypothetical protein | - |
| ABUL70_RS07635 (ABUL70_07665) | - | 411796..412149 (-) | 354 | WP_000172107.1 | helix-turn-helix domain-containing protein | - |
| ABUL70_RS07640 (ABUL70_07670) | - | 412362..412613 (+) | 252 | WP_228244385.1 | helix-turn-helix domain-containing protein | - |
| ABUL70_RS07645 (ABUL70_07675) | - | 412610..412960 (+) | 351 | WP_001246222.1 | helix-turn-helix domain-containing protein | - |
| ABUL70_RS07650 (ABUL70_07680) | - | 412957..413124 (+) | 168 | WP_000969632.1 | hypothetical protein | - |
| ABUL70_RS07655 (ABUL70_07685) | - | 413154..413330 (+) | 177 | WP_001084331.1 | hypothetical protein | - |
| ABUL70_RS07660 (ABUL70_07690) | - | 413335..414075 (+) | 741 | WP_000190244.1 | DnaD domain protein | - |
| ABUL70_RS07665 (ABUL70_07695) | - | 414023..414886 (+) | 864 | WP_001148230.1 | ATP-binding protein | - |
| ABUL70_RS07670 (ABUL70_07700) | - | 414889..415083 (+) | 195 | WP_000337984.1 | hypothetical protein | - |
| ABUL70_RS07675 (ABUL70_07705) | abrB | 415100..415378 (+) | 279 | WP_000799098.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| ABUL70_RS07680 (ABUL70_07710) | - | 415371..415730 (+) | 360 | WP_001125972.1 | hypothetical protein | - |
| ABUL70_RS07685 (ABUL70_07715) | - | 415749..415916 (+) | 168 | WP_000717829.1 | DUF3954 domain-containing protein | - |
| ABUL70_RS07690 (ABUL70_07720) | - | 415942..416193 (+) | 252 | WP_000109543.1 | hypothetical protein | - |
| ABUL70_RS07695 (ABUL70_07725) | - | 416213..416722 (+) | 510 | WP_001054607.1 | dUTP diphosphatase | - |
| ABUL70_RS07700 (ABUL70_07730) | - | 416763..417236 (+) | 474 | WP_001134294.1 | hypothetical protein | - |
| ABUL70_RS07705 (ABUL70_07735) | - | 417233..417670 (+) | 438 | WP_002134064.1 | hypothetical protein | - |
| ABUL70_RS07710 (ABUL70_07740) | - | 417706..417903 (+) | 198 | WP_000323893.1 | hypothetical protein | - |
| ABUL70_RS07715 (ABUL70_07745) | - | 417896..418429 (+) | 534 | WP_001030635.1 | hypothetical protein | - |
| ABUL70_RS07720 (ABUL70_07750) | - | 418468..418842 (+) | 375 | WP_228161154.1 | hypothetical protein | - |
| ABUL70_RS07725 (ABUL70_07755) | - | 418886..419158 (+) | 273 | WP_001268380.1 | hypothetical protein | - |
| ABUL70_RS07730 (ABUL70_07760) | - | 419198..419407 (+) | 210 | WP_000670920.1 | hypothetical protein | - |
| ABUL70_RS07735 (ABUL70_07765) | - | 419438..419605 (+) | 168 | WP_000539656.1 | hypothetical protein | - |
| ABUL70_RS07740 (ABUL70_07770) | - | 419749..420177 (+) | 429 | WP_000350118.1 | hypothetical protein | - |
| ABUL70_RS07745 (ABUL70_07775) | - | 420222..420383 (+) | 162 | WP_002134063.1 | hypothetical protein | - |
| ABUL70_RS07750 | - | 420574..420783 (+) | 210 | WP_071686402.1 | hypothetical protein | - |
| ABUL70_RS07755 (ABUL70_07785) | - | 420817..420993 (+) | 177 | WP_000406974.1 | hypothetical protein | - |
| ABUL70_RS07760 (ABUL70_07790) | - | 421029..421226 (+) | 198 | WP_000351065.1 | hypothetical protein | - |
| ABUL70_RS07765 (ABUL70_07795) | - | 421223..421501 (+) | 279 | WP_000873130.1 | hypothetical protein | - |
| ABUL70_RS07770 (ABUL70_07800) | - | 421621..422007 (+) | 387 | WP_001226456.1 | YopX family protein | - |
| ABUL70_RS07775 (ABUL70_07805) | - | 422136..422306 (+) | 171 | WP_000677456.1 | hypothetical protein | - |
| ABUL70_RS07780 (ABUL70_07810) | - | 422334..422816 (+) | 483 | WP_000166188.1 | ArpU family phage packaging/lysis transcriptional regulator | - |
| ABUL70_RS07785 (ABUL70_07815) | - | 422816..423358 (+) | 543 | WP_016090301.1 | site-specific integrase | - |
| ABUL70_RS07790 (ABUL70_07820) | - | 424004..424246 (+) | 243 | WP_000370222.1 | hypothetical protein | - |
| ABUL70_RS07795 (ABUL70_07825) | - | 424239..424673 (+) | 435 | WP_000002735.1 | hypothetical protein | - |
| ABUL70_RS07800 (ABUL70_07830) | - | 424673..424897 (+) | 225 | WP_000964495.1 | hypothetical protein | - |
| ABUL70_RS07805 (ABUL70_07835) | - | 424902..425066 (+) | 165 | WP_001091354.1 | helix-turn-helix domain-containing protein | - |
| ABUL70_RS07810 | - | 425069..425314 (+) | 246 | WP_000869623.1 | hypothetical protein | - |
| ABUL70_RS07815 (ABUL70_07845) | - | 425346..425708 (+) | 363 | WP_228161156.1 | HNH endonuclease | - |
| ABUL70_RS07820 (ABUL70_07850) | - | 425808..426329 (+) | 522 | WP_000113652.1 | phage terminase small subunit P27 family | - |
| ABUL70_RS07825 (ABUL70_07855) | - | 426339..428054 (+) | 1716 | WP_001082759.1 | terminase large subunit | - |
| ABUL70_RS07830 (ABUL70_07860) | - | 428068..429288 (+) | 1221 | WP_000264107.1 | phage portal protein | - |
| ABUL70_RS07835 (ABUL70_07865) | - | 429383..430576 (-) | 1194 | WP_000499523.1 | IS110-like element ISBth13 family transposase | - |
| ABUL70_RS07840 (ABUL70_07870) | - | 430867..431565 (+) | 699 | WP_002134054.1 | head maturation protease, ClpP-related | - |
| ABUL70_RS07845 (ABUL70_07875) | - | 431603..432775 (+) | 1173 | WP_001123701.1 | phage major capsid protein | - |
| ABUL70_RS07850 (ABUL70_07880) | - | 432810..433103 (+) | 294 | WP_000904085.1 | head-tail connector protein | - |
| ABUL70_RS07855 (ABUL70_07885) | - | 433100..433444 (+) | 345 | WP_001068032.1 | phage head closure protein | - |
| ABUL70_RS07860 (ABUL70_07890) | - | 433432..433869 (+) | 438 | WP_000818832.1 | HK97-gp10 family putative phage morphogenesis protein | - |
| ABUL70_RS07865 (ABUL70_07895) | - | 433866..434228 (+) | 363 | WP_001243517.1 | DUF3168 domain-containing protein | - |
| ABUL70_RS07870 (ABUL70_07900) | - | 434244..434828 (+) | 585 | WP_001251821.1 | major tail protein | - |
| ABUL70_RS07875 (ABUL70_07905) | gpG | 434885..435259 (+) | 375 | WP_015382157.1 | phage tail assembly chaperone G | - |
| ABUL70_RS07880 (ABUL70_07910) | - | 435424..440421 (+) | 4998 | WP_044157404.1 | phage tail tape measure protein | - |
| ABUL70_RS07885 (ABUL70_07915) | - | 440461..441930 (+) | 1470 | WP_015382160.1 | distal tail protein Dit | - |
| ABUL70_RS07890 (ABUL70_07920) | - | 441927..446321 (+) | 4395 | WP_015382161.1 | phage tail spike protein | - |
| ABUL70_RS07895 (ABUL70_07925) | - | 446338..446715 (+) | 378 | WP_000354142.1 | hypothetical protein | - |
| ABUL70_RS07900 (ABUL70_07930) | - | 446752..447033 (+) | 282 | WP_000215408.1 | hypothetical protein | - |
| ABUL70_RS07905 (ABUL70_07935) | - | 447036..447242 (+) | 207 | WP_000159646.1 | hypothetical protein | - |
| ABUL70_RS07910 (ABUL70_07940) | - | 447242..448060 (+) | 819 | WP_000542507.1 | GH25 family lysozyme | - |
| ABUL70_RS07915 (ABUL70_07945) | - | 448105..448413 (-) | 309 | WP_002133890.1 | YolD-like family protein | - |
| ABUL70_RS07920 (ABUL70_07950) | - | 448710..449498 (+) | 789 | WP_000794364.1 | sulfotransferase family 2 domain-containing protein | - |
| ABUL70_RS07925 (ABUL70_07955) | - | 449587..450360 (+) | 774 | WP_000027993.1 | sulfite exporter TauE/SafE family protein | - |
| ABUL70_RS07930 (ABUL70_07960) | - | 450401..451192 (+) | 792 | WP_000349585.1 | sulfotransferase family 2 domain-containing protein | - |
| ABUL70_RS07935 (ABUL70_07965) | - | 451261..451665 (-) | 405 | WP_000247457.1 | DUF6262 family protein | - |
| ABUL70_RS07940 (ABUL70_07970) | - | 451658..453667 (-) | 2010 | WP_001028065.1 | tyrosine-type recombinase/integrase | - |
| ABUL70_RS07945 (ABUL70_07975) | - | 453664..454761 (-) | 1098 | WP_000477499.1 | tyrosine-type recombinase/integrase | - |
Sequence
Protein
Download Length: 92 a.a. Molecular weight: 9941.45 Da Isoelectric Point: 5.1782
>NTDB_id=1012037 ABUL70_RS07675 WP_000799098.1 415100..415378(+) (abrB) [Bacillus thuringiensis strain HD-1]
MKNTGVSRKVDELGRVVIPVELRRNLGIVEGTALGFHVEGENIVLKKQDKSCFVTGEVSESNIELLEGRMFLSKEGASEL
LGAIEKSGIVNA
MKNTGVSRKVDELGRVVIPVELRRNLGIVEGTALGFHVEGENIVLKKQDKSCFVTGEVSESNIELLEGRMFLSKEGASEL
LGAIEKSGIVNA
Nucleotide
Download Length: 279 bp
>NTDB_id=1012037 ABUL70_RS07675 WP_000799098.1 415100..415378(+) (abrB) [Bacillus thuringiensis strain HD-1]
ATGAAAAACACAGGTGTTTCAAGAAAAGTGGACGAGCTAGGGCGTGTGGTAATTCCAGTAGAGTTACGCAGAAATTTAGG
AATTGTTGAAGGTACAGCATTAGGATTTCATGTTGAAGGGGAAAACATCGTTTTAAAAAAACAGGATAAGTCATGCTTTG
TAACGGGTGAAGTTTCTGAATCAAACATAGAGTTGCTAGAGGGTCGGATGTTTTTAAGTAAGGAAGGTGCAAGTGAGTTG
CTGGGCGCTATTGAGAAGAGTGGGATTGTAAATGCCTAA
ATGAAAAACACAGGTGTTTCAAGAAAAGTGGACGAGCTAGGGCGTGTGGTAATTCCAGTAGAGTTACGCAGAAATTTAGG
AATTGTTGAAGGTACAGCATTAGGATTTCATGTTGAAGGGGAAAACATCGTTTTAAAAAAACAGGATAAGTCATGCTTTG
TAACGGGTGAAGTTTCTGAATCAAACATAGAGTTGCTAGAGGGTCGGATGTTTTTAAGTAAGGAAGGTGCAAGTGAGTTG
CTGGGCGCTATTGAGAAGAGTGGGATTGTAAATGCCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
56.322 |
94.565 |
0.533 |