Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | ABUL70_RS05555 | Genome accession | NZ_CP158703 |
| Coordinates | 40329..40613 (-) | Length | 94 a.a. |
| NCBI ID | WP_000843036.1 | Uniprot ID | A0A9W5VII1 |
| Organism | Bacillus thuringiensis strain HD-1 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 35329..45613
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABUL70_RS05520 (ABUL70_05545) | tmk | 35521..36147 (+) | 627 | WP_000677214.1 | dTMP kinase | - |
| ABUL70_RS05525 (ABUL70_05550) | holB | 36183..37166 (+) | 984 | WP_000169563.1 | DNA polymerase III subunit delta' | - |
| ABUL70_RS05530 (ABUL70_05555) | - | 37172..37999 (+) | 828 | WP_000272429.1 | stage 0 sporulation family protein | - |
| ABUL70_RS05535 (ABUL70_05560) | yabA | 38014..38364 (+) | 351 | WP_000412063.1 | DNA replication initiation control protein YabA | - |
| ABUL70_RS05540 (ABUL70_05565) | - | 38447..39187 (+) | 741 | WP_001055369.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| ABUL70_RS05545 (ABUL70_05570) | - | 39174..39464 (+) | 291 | WP_000414350.1 | GIY-YIG nuclease family protein | - |
| ABUL70_RS05550 (ABUL70_05575) | rsmI | 39433..40308 (+) | 876 | WP_000267822.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| ABUL70_RS05555 (ABUL70_05580) | abrB | 40329..40613 (-) | 285 | WP_000843036.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| ABUL70_RS05560 (ABUL70_05585) | metG | 41099..43081 (+) | 1983 | WP_000134142.1 | methionine--tRNA ligase | - |
| ABUL70_RS05565 (ABUL70_05590) | - | 43248..44015 (+) | 768 | WP_000895843.1 | TatD family hydrolase | - |
| ABUL70_RS05570 (ABUL70_05595) | rnmV | 44230..44787 (+) | 558 | WP_000692835.1 | ribonuclease M5 | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10490.17 Da Isoelectric Point: 4.7174
>NTDB_id=1012032 ABUL70_RS05555 WP_000843036.1 40329..40613(-) (abrB) [Bacillus thuringiensis strain HD-1]
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QILNELQDYIETAK
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QILNELQDYIETAK
Nucleotide
Download Length: 285 bp
>NTDB_id=1012032 ABUL70_RS05555 WP_000843036.1 40329..40613(-) (abrB) [Bacillus thuringiensis strain HD-1]
ATGAAATCTACTGGTATTGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGACGCTCTTGAAATCTATGTTGATGACGAAAAAATCATCTTAAAGAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGACGGTAACCTTTCTTTAGCTGAAGGTAAAATCATCTTAAGCAAAGAAGGCGCTGAG
CAAATCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
ATGAAATCTACTGGTATTGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGACGCTCTTGAAATCTATGTTGATGACGAAAAAATCATCTTAAAGAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGACGGTAACCTTTCTTTAGCTGAAGGTAAAATCATCTTAAGCAAAGAAGGCGCTGAG
CAAATCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
85.106 |
100 |
0.851 |