Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   LJDFIFNA_RS08415 Genome accession   NZ_LR822060
Coordinates   1643432..1644235 (-) Length   267 a.a.
NCBI ID   WP_001134198.1    Uniprot ID   -
Organism   Staphylococcus aureus isolate P3.1     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 1638432..1649235
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LJDFIFNA_RS08390 (BKMNNEJI_01611) metG 1638729..1640702 (-) 1974 WP_001051129.1 methionine--tRNA ligase -
  LJDFIFNA_RS08395 (BKMNNEJI_01612) rsmI 1640987..1641826 (-) 840 WP_000279926.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  LJDFIFNA_RS08400 (BKMNNEJI_01613) - 1641828..1642076 (-) 249 WP_000377064.1 GIY-YIG nuclease family protein -
  LJDFIFNA_RS08405 (BKMNNEJI_01614) - 1642069..1642794 (-) 726 WP_000910686.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  LJDFIFNA_RS08410 (BKMNNEJI_01615) yabA 1643068..1643415 (-) 348 WP_000375683.1 DNA replication initiation control protein YabA -
  LJDFIFNA_RS08415 (BKMNNEJI_01616) yaaT 1643432..1644235 (-) 804 WP_001134198.1 PSP1 domain-containing protein Regulator
  LJDFIFNA_RS08420 (BKMNNEJI_01617) - 1644236..1645162 (-) 927 WP_000344336.1 DNA polymerase III subunit delta' C-terminal domain-containing protein -
  LJDFIFNA_RS08425 (BKMNNEJI_01618) - 1645376..1645705 (-) 330 WP_000781979.1 cyclic-di-AMP receptor -
  LJDFIFNA_RS08430 (BKMNNEJI_01619) tmk 1645733..1646350 (-) 618 WP_001272126.1 dTMP kinase -
  LJDFIFNA_RS08435 (BKMNNEJI_01620) - 1646352..1647689 (-) 1338 WP_000812829.1 aminotransferase class V-fold PLP-dependent enzyme -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 30174.85 Da        Isoelectric Point: 4.6279

>NTDB_id=1011990 LJDFIFNA_RS08415 WP_001134198.1 1643432..1644235(-) (yaaT) [Staphylococcus aureus isolate P3.1]
MPNVIGVQFQKAGKLEYYTPNDIQVDIEGWVVVESKRGIEIGIVKNPLMDIAEEDVVLPLKNIIRIADDKDIDKFNCNER
DAENALILCKDIVREQGLDMRLVNCEYTLDKSKVIFNFTADDRIDFRKLVKILAQHLKTRIELRQIGVRDEAKLLGGIGP
CGRSLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGACGRLMCCLKYENDYYEEVRAQLPDIGEAIETPDGNGKVVALNI
LDISMQVKLEGHEQPLEYKLEEIETMH

Nucleotide


Download         Length: 804 bp        

>NTDB_id=1011990 LJDFIFNA_RS08415 WP_001134198.1 1643432..1644235(-) (yaaT) [Staphylococcus aureus isolate P3.1]
ATGCCAAATGTAATAGGTGTTCAGTTTCAAAAAGCGGGAAAATTAGAATATTATACACCTAATGATATACAAGTAGATAT
AGAAGGCTGGGTAGTTGTCGAATCTAAAAGAGGCATAGAGATAGGTATTGTTAAAAATCCATTAATGGATATTGCTGAAG
AGGATGTTGTGTTACCTCTTAAAAATATTATTCGCATTGCTGATGACAAAGATATTGATAAATTTAATTGTAATGAACGA
GATGCTGAAAATGCATTAATACTATGTAAAGACATTGTAAGAGAACAAGGTTTGGACATGCGTTTAGTCAATTGCGAATA
TACATTAGATAAATCGAAAGTTATTTTTAATTTTACGGCGGATGATCGTATTGATTTTAGAAAATTAGTAAAAATATTAG
CGCAACATTTAAAAACACGTATCGAGTTGAGACAAATTGGTGTAAGGGATGAAGCCAAATTGCTTGGCGGTATCGGACCT
TGTGGTAGGTCGTTATGTTGTTCTACATTTTTAGGGGATTTTGAACCAGTATCGATTAAGATGGCTAAGGATCAAAATTT
ATCATTAAATCCAACTAAAATTTCTGGTGCATGTGGTCGTTTGATGTGTTGTTTAAAATATGAAAATGACTATTATGAGG
AAGTACGTGCACAATTACCTGATATTGGTGAAGCAATTGAAACGCCTGATGGTAACGGGAAAGTAGTTGCTTTAAATATA
TTAGACATTTCTATGCAGGTGAAGCTTGAGGGACATGAACAGCCACTTGAATATAAATTAGAAGAAATAGAAACTATGCA
TTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

62.357

98.502

0.614