Detailed information NTG1011629

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: ABS324_RS24370
• Genome accession: NZ_CP158496
• Coordinates: 4750461..4753061 (-)
• Length: 866 a.a.
• NCBI ID: WP_098616871.1
• Uniprot ID: -
• Organism: Bacillus cereus strain NBNZ-2162
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 4745461..4758061

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABS324_RS24340 (ABS324_24340)	fabF	4745632..4746870 (-)	1239	WP_000412656.1	beta-ketoacyl-ACP synthase II	-
ABS324_RS24345 (ABS324_24345)	fabH	4746902..4747834 (-)	933	WP_001100533.1	beta-ketoacyl-ACP synthase III	-
ABS324_RS24350 (ABS324_24350)	comZ	4748215..4748391 (-)	177	WP_001986215.1	ComZ family protein	Regulator
ABS324_RS24355 (ABS324_24355)	-	4748446..4749318 (-)	873	WP_001986101.1	NAD(P)-dependent oxidoreductase	-
ABS324_RS24360 (ABS324_24360)	-	4749348..4750082 (-)	735	WP_000028714.1	hydrolase	-
ABS324_RS24365 (ABS324_24365)	-	4750239..4750421 (+)	183	WP_001211117.1	YjzD family protein	-
ABS324_RS24370 (ABS324_24370)	clpC	4750461..4753061 (-)	2601	WP_098616871.1	ATP-dependent chaperone ClpB	Regulator
ABS324_RS24375 (ABS324_24375)	-	4753270..4753449 (-)	180	WP_000531421.1	YjzC family protein	-
ABS324_RS24380 (ABS324_24380)	-	4753941..4754750 (+)	810	WP_001041232.1	Cof-type HAD-IIB family hydrolase	-
ABS324_RS24385 (ABS324_24385)	-	4754855..4754995 (+)	141	WP_000516816.1	hypothetical protein	-
ABS324_RS24390 (ABS324_24390)	-	4754996..4755193 (+)	198	WP_000527407.1	DUF3813 domain-containing protein	-
ABS324_RS24395 (ABS324_24395)	-	4755219..4756076 (-)	858	WP_000364437.1	YitT family protein	-
ABS324_RS24400 (ABS324_24400)	-	4756177..4756308 (+)	132	WP_001120851.1	DUF3941 domain-containing protein	-
ABS324_RS24405 (ABS324_24405)	prsA	4756438..4757295 (+)	858	WP_001214216.1	peptidylprolyl isomerase PrsA	-

Sequence

Protein

• Length: 866 a.a.
• Molecular weight: 97324.31 Da
• Isoelectric Point: 5.1938

>NTDB_id=1011629 ABS324_RS24370 WP_098616871.1 4750461..4753061(-) (clpC) [Bacillus cereus strain NBNZ-2162]
MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLALLEEQDGLAVRIFQKMNVDIEALKQGAESLIKKKPSVTGSGAE
VGKLYVTSALQQLLVRAGKEAEKLQDDYISVEHVLLAFSEEKGDINQLFTRLHITKDNLLQSLMTVRGNQRVTSQNPEAT
YEALEKYGRDLVAEVRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEGLKDRTI
FALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEGAMDAGNMLKPMLARGELHCIGATTLD
EYRKYIEKDPALERRFQQVLAEEPTVEDTISILRGLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEA
CATIRTEIDSMPTELDEVTRRIMQLEIEEAALGKETDRGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHKVRDLRE
HLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLREEVSEEEIADIVSRWTGIPVAKLVEG
EREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDM
SEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVVLLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVI
IMTSNIGSAHLLDGLEEDGSIKEESRDLVMGQLRGHFRPEFLNRVDEIILFKPLTTNEIKGIVDKIVKELQGRLADRHIT
VALTDAAKEFVVEAGFDPMYGARPLKRYVQRQVETKLARELIAGTITDNSHVVVDVENNELVVHVK

Nucleotide

• Length: 2601 bp

>NTDB_id=1011629 ABS324_RS24370 WP_098616871.1 4750461..4753061(-) (clpC) [Bacillus cereus strain NBNZ-2162]
ATGGACTTAAATCAAATGACAACAAAAACACAAGAGGCGATTATGAGTGCCCAATCTTTAGCGGTATCTCACCATCACCA
AGAGGTGGATACTGTTCATCTATTACTTGCATTATTAGAAGAGCAAGATGGATTAGCAGTACGTATATTTCAAAAAATGA
ATGTTGATATAGAAGCATTAAAGCAAGGTGCTGAAAGTTTAATTAAAAAGAAACCTTCTGTAACGGGGAGCGGTGCAGAA
GTTGGAAAATTGTATGTAACGAGCGCTCTGCAACAACTGCTTGTAAGAGCAGGGAAAGAAGCAGAAAAACTGCAGGATGA
TTACATTTCAGTAGAACATGTATTGCTTGCTTTTTCTGAAGAAAAAGGCGATATAAATCAATTATTTACAAGATTGCATA
TTACGAAAGATAACTTATTACAGTCTTTAATGACAGTTCGGGGGAATCAAAGAGTGACTAGTCAAAATCCAGAAGCAACT
TATGAAGCGTTAGAAAAATATGGCCGTGATTTAGTAGCGGAAGTGAGAGCAGGGAAAATCGATCCTGTAATCGGCCGTGA
TAGTGAAATACGACGTGTAATTCGTATTCTTTCACGTAAAACGAAAAACAATCCTGTTTTAATTGGGGAGCCAGGTGTTG
GTAAAACAGCAATCGTTGAAGGGCTAGCACAGCGTATCGTGAAAAAGGATGTACCTGAAGGATTGAAAGATAGAACGATT
TTTGCGTTAGATATGAGTGCGCTCGTAGCTGGTGCGAAATTCCGTGGTGAGTTCGAAGAGCGTTTGCAAGCTGTATTAAA
TGAAATTAAAAAGAGTGAAGGCCGCATTTTATTATTCATTGATGAACTTCATACAATTGTTGGAGCTGGTAAAACTGAAG
GTGCGATGGATGCAGGAAATATGTTAAAACCGATGCTTGCACGTGGTGAACTGCATTGTATCGGGGCGACGACACTCGAT
GAATATCGTAAATATATTGAGAAAGATCCAGCTCTAGAAAGACGTTTCCAACAAGTATTAGCAGAAGAACCAACTGTTGA
AGATACAATTTCAATTTTACGTGGATTAAAAGAACGCTTTGAAATTTATCACGGTGTAAATATTCATGACCGTGCGATTG
TAGCAGCGTCAGTTTTATCAGATCGATATATTTCAGATCGCTTCTTACCAGATAAAGCAATTGACCTTGTTGACGAAGCA
TGCGCAACAATTCGTACAGAAATTGATTCTATGCCGACAGAATTAGATGAAGTAACGCGCCGCATTATGCAGCTGGAAAT
TGAAGAAGCGGCTCTTGGAAAAGAAACGGATCGTGGTAGCCAAGAGCGTCTAAAAACATTGCAACGTGAATTATCGGATT
TAAAAGAAGTTGCAAGTGGTATGAGAGCGAAATGGGAGAAAGAAAAAGAAGACATTCACAAAGTTCGTGACTTACGTGAA
CATTTAGAACGTCTGCGTCGTGAATTAGAAGAAGCAGAAGGTAATTACGATTTAAATAAAGCAGCCGAACTTCGTCATGG
GAAAATTCCAGCAATTGAAAAAGAGTTAAAAGAAGCGGAAGAAATGGGCGCGCATAATAAACAAGAAAATCGTTTATTAC
GTGAGGAAGTAAGTGAAGAAGAAATTGCAGATATTGTTTCACGCTGGACTGGTATTCCTGTTGCGAAACTCGTGGAAGGT
GAACGCGAGAAATTATTACGCTTAGAGCAAATCTTATCAGAGCGTGTCATCGGACAAGAGGAAGCAGTAAGCTTAGTGTC
AGACGCAGTTCTTCGTGCTCGCGCTGGTATTAAAGATCCGAACCGCCCGATTGGTTCTTTCATCTTCTTAGGACCAACAG
GTGTTGGTAAAACAGAACTTGCAAAAACGCTAGCCCAGTCTTTATTCGATAGTGAAGAGCAAATGATTCGCATTGACATG
TCTGAGTATATGGAGAAACACGCAGTGTCACGCTTAATTGGTGCACCTCCTGGATATGTAGGATATGAGGAAGGTGGTCA
ATTAACTGAAGCGGTAAGACGTAAACCATATTCCGTTGTTTTATTAGATGAAATTGAAAAAGCACATCCAGAAGTATTCA
ACATTTTATTACAAATGTTAGATGATGGGCGCATTACAGATTCGCAAGGTCGTACAGTGGACTTTAAAAATACAGTTATT
ATTATGACTTCAAATATCGGATCTGCTCATTTACTAGATGGATTAGAAGAAGATGGTTCGATTAAAGAGGAATCAAGAGA
CCTTGTAATGGGGCAATTAAGAGGACATTTCCGCCCTGAATTTTTAAACCGTGTTGATGAAATTATTTTATTCAAACCTC
TTACAACGAATGAAATTAAAGGCATTGTTGATAAAATTGTAAAAGAACTACAAGGTCGTCTAGCTGACCGTCACATTACA
GTAGCATTAACAGATGCAGCAAAAGAATTTGTTGTGGAAGCTGGTTTCGACCCAATGTACGGAGCTCGTCCACTAAAACG
ATACGTACAGCGTCAAGTGGAAACGAAATTAGCACGAGAATTAATTGCAGGAACAATTACTGACAATAGTCACGTAGTTG
TTGATGTAGAAAATAACGAATTAGTCGTTCATGTGAAATAA

Domains

Predicted by InterproScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (602-768)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (97-148)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (17-68)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (774-854)

• ATPase family associated with various cellular activities (AAA) (AAA) (206-339)

• AAA lid domain (AAA_lid_9) (345-447)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Bacillus subtilis subsp. subtilis str. 168	47.886	100	0.484
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	42.153	100	0.425
clpC	Lactococcus lactis subsp. cremoris KW2	47.059	82.448	0.388