Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   H1X13_RS05425 Genome accession   NZ_LR822034
Coordinates   1038250..1038732 (-) Length   160 a.a.
NCBI ID   WP_011226072.1    Uniprot ID   Q5M461
Organism   Streptococcus thermophilus isolate STH_CIRM_1049     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1033250..1043732
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H1X13_RS05405 (STHERMO_1206) pepT 1033730..1034953 (-) 1224 WP_180480972.1 peptidase T -
  H1X13_RS05410 (STHERMO_1207) lepB 1035162..1035719 (-) 558 WP_002953084.1 signal peptidase I -
  H1X13_RS05415 (STHERMO_1208) - 1035842..1037071 (-) 1230 WP_002953086.1 tetratricopeptide repeat protein -
  H1X13_RS05420 (STHERMO_1209) - 1037061..1038239 (-) 1179 WP_096811486.1 AI-2E family transporter -
  H1X13_RS05425 (STHERMO_1210) mutX 1038250..1038732 (-) 483 WP_011226072.1 NUDIX hydrolase Machinery gene
  H1X13_RS05430 (STHERMO_1211) ftsX 1038888..1039817 (-) 930 WP_011681194.1 permease-like cell division protein FtsX -
  H1X13_RS05435 (STHERMO_1212) ftsE 1039810..1040502 (-) 693 WP_002953094.1 cell division ATP-binding protein FtsE -
  H1X13_RS05445 (STHERMO_1214) queG 1041741..1042859 (-) 1119 WP_180480973.1 tRNA epoxyqueuosine(34) reductase QueG -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18869.36 Da        Isoelectric Point: 4.7200

>NTDB_id=1011041 H1X13_RS05425 WP_011226072.1 1038250..1038732(-) (mutX) [Streptococcus thermophilus isolate STH_CIRM_1049]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREIFEETHLTVKKMDFKGMITFPEFTPGH
DWYTYVFKVTDFEGKLISDEESREGTLEWVPYDQVLTKQTWEGDYEIFKWILEDKPFFSAKFSYDCNQNLIDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=1011041 H1X13_RS05425 WP_011226072.1 1038250..1038732(-) (mutX) [Streptococcus thermophilus isolate STH_CIRM_1049]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGGAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTCGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTTTCGAGGAAACTCATTTGACAGTGAAAAAGATGGACTTCAAAGGTATGATTACCTTCCCAGAATTTACTCCGGGCCAC
GATTGGTATACCTATGTCTTTAAGGTGACTGATTTTGAAGGAAAACTCATTTCTGATGAGGAATCTCGTGAAGGGACACT
TGAATGGGTACCATATGATCAGGTTTTAACTAAACAAACCTGGGAAGGTGACTATGAGATTTTTAAGTGGATTCTAGAAG
ATAAACCTTTCTTCTCTGCAAAATTTAGCTACGATTGTAACCAAAACTTGATAGATAAAACTGTAACATTTTATGATAAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5M461

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706