Detailed information NTG1010948

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ABS740_RS10135
• Genome accession: NZ_CP158366
• Coordinates: 2148385..2149086 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain NAB02B
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2143385..2154086

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABS740_RS10105 (ABS740_10100)	-	2143691..2144134 (-)	444	WP_001246675.1	SRPBCC family protein	-
ABS740_RS10110 (ABS740_10105)	tadA	2144204..2144707 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
ABS740_RS10115 (ABS740_10110)	-	2144714..2145838 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
ABS740_RS10120 (ABS740_10115)	ung	2145835..2146548 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
ABS740_RS10125 (ABS740_10120)	-	2146599..2147195 (-)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
ABS740_RS10130 (ABS740_10125)	gspK	2147426..2148385 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
ABS740_RS10135 (ABS740_10130)	xcpW	2148385..2149086 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ABS740_RS10140 (ABS740_10135)	xcpV	2149086..2149466 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
ABS740_RS10145 (ABS740_10140)	-	2149456..2150010 (-)	555	WP_000841373.1	type II secretion system protein	-
ABS740_RS10150 (ABS740_10145)	-	2150020..2150628 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ABS740_RS10155 (ABS740_10150)	-	2150666..2151439 (-)	774	WP_000497298.1	TatD family hydrolase	-
ABS740_RS10160 (ABS740_10155)	-	2151457..2151798 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
ABS740_RS10165 (ABS740_10160)	-	2151810..2152790 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
ABS740_RS10170 (ABS740_10165)	kdsB	2152802..2153563 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=1010948 ABS740_RS10135 WP_000594589.1 2148385..2149086(-) (xcpW) [Acinetobacter baumannii strain NAB02B]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=1010948 ABS740_RS10135 WP_000594589.1 2148385..2149086(-) (xcpW) [Acinetobacter baumannii strain NAB02B]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996