Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   H1W74_RS07745 Genome accession   NZ_LR822031
Coordinates   1505403..1506134 (-) Length   243 a.a.
NCBI ID   WP_002948813.1    Uniprot ID   -
Organism   Streptococcus thermophilus isolate STH_CIRM_1047     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1500403..1511134
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H1W74_RS07720 (STHERMO_1756) - 1500428..1500784 (-) 357 WP_022096682.1 DUF805 domain-containing protein -
  H1W74_RS07725 (STHERMO_1757) - 1501004..1501300 (-) 297 WP_232086647.1 hypothetical protein -
  H1W74_RS07730 (STHERMO_1758) - 1501634..1502884 (-) 1251 WP_002948806.1 glutamate-5-semialdehyde dehydrogenase -
  H1W74_RS07735 (STHERMO_1759) proB 1502886..1503689 (-) 804 WP_002948808.1 glutamate 5-kinase -
  H1W74_RS07740 - 1503810..1505400 (-) 1591 Protein_1491 ABC transporter permease -
  H1W74_RS07745 (STHERMO_1762) pptA 1505403..1506134 (-) 732 WP_002948813.1 ABC transporter ATP-binding protein Regulator
  H1W74_RS07750 (STHERMO_1764) - 1506407..1507140 (+) 734 Protein_1493 DUF554 domain-containing protein -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 27692.52 Da        Isoelectric Point: 4.8191

>NTDB_id=1010747 H1W74_RS07745 WP_002948813.1 1505403..1506134(-) (pptA) [Streptococcus thermophilus isolate STH_CIRM_1047]
MIRFEHVTKRYENKDALSDLNLEIRDGEILGLISHNGAGKTTTISILTSIIEASYGEVYVDDMALSQHRDAIKKKIAYVP
DSPDLFLNLTANDYWYFLTRIYDLEASQVEERLTDLMSTFDLTENRYNLISSFSHGMRQKVVVIDAFLVNPQIWILDEPL
TGLDPQASYDLKEAMRNHAKEGNSVLFSTHVLSVAEQICDRIGILKKGKLIFQGSIAELKHQYPDKDLETIYLEMAGRKA
EEV

Nucleotide


Download         Length: 732 bp        

>NTDB_id=1010747 H1W74_RS07745 WP_002948813.1 1505403..1506134(-) (pptA) [Streptococcus thermophilus isolate STH_CIRM_1047]
ATGATTCGTTTTGAACATGTAACGAAACGTTATGAAAATAAGGATGCTCTCTCAGATCTTAATCTCGAGATTCGAGACGG
TGAAATCCTTGGTTTGATTAGTCACAATGGAGCTGGTAAAACCACTACCATTTCCATTTTGACGTCTATTATTGAAGCTA
GTTATGGAGAGGTTTACGTCGATGATATGGCCCTCAGTCAGCATCGTGATGCTATTAAGAAGAAAATAGCATATGTGCCA
GATTCACCGGACTTATTTCTAAATTTGACTGCCAATGATTACTGGTACTTTTTGACACGTATCTATGATTTGGAAGCTAG
TCAGGTTGAGGAACGTTTGACTGATCTCATGTCTACCTTTGACTTGACTGAGAATCGCTATAATCTCATTTCATCCTTCT
CTCATGGTATGCGTCAGAAGGTTGTTGTTATCGATGCTTTTCTGGTTAATCCACAGATTTGGATTTTAGATGAGCCTTTG
ACTGGTCTGGACCCACAGGCATCTTATGATTTGAAAGAAGCTATGCGTAACCATGCTAAGGAGGGCAATAGTGTGCTCTT
CTCAACCCACGTTTTAAGTGTAGCTGAACAGATCTGTGATCGCATCGGTATTTTGAAGAAAGGAAAACTCATCTTCCAAG
GGTCTATAGCTGAACTTAAGCATCAGTACCCTGACAAGGATTTGGAAACCATTTATCTAGAAATGGCTGGACGTAAGGCC
GAGGAGGTGTAG

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

37.975

97.531

0.37
  pptA Streptococcus salivarius strain HSISS4

37.131

97.531

0.362