Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   H1W74_RS07465 Genome accession   NZ_LR822031
Coordinates   1449047..1450123 (-) Length   358 a.a.
NCBI ID   WP_022096499.1    Uniprot ID   -
Organism   Streptococcus thermophilus isolate STH_CIRM_1047     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1444047..1455123
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H1W74_RS07445 (STHERMO_1688) - 1445159..1447225 (-) 2067 WP_022096502.1 cation:proton antiporter -
  H1W74_RS07450 (STHERMO_1689) - 1447234..1447476 (-) 243 WP_022096501.1 hypothetical protein -
  H1W74_RS07455 (STHERMO_1690) - 1447473..1448021 (-) 549 WP_004197152.1 tRNA (mnm(5)s(2)U34)-methyltransferase -
  H1W74_RS07460 (STHERMO_1691) - 1448018..1448962 (-) 945 WP_022096500.1 TIGR01212 family radical SAM protein -
  H1W74_RS07465 (STHERMO_1692) sepM 1449047..1450123 (-) 1077 WP_022096499.1 SepM family pheromone-processing serine protease Regulator
  H1W74_RS07470 (STHERMO_1693) coaD 1450101..1450598 (-) 498 WP_022096498.1 pantetheine-phosphate adenylyltransferase -
  H1W74_RS07475 (STHERMO_1694) rsmD 1450632..1451231 (-) 600 Protein_1436 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  H1W74_RS07480 (STHERMO_1695) trxB 1451322..1452275 (-) 954 WP_255136104.1 thioredoxin-disulfide reductase -
  H1W74_RS07485 (STHERMO_1696) - 1452308..1452532 (-) 225 WP_022096496.1 DUF4059 family protein -
  H1W74_RS07490 (STHERMO_1697) amiE 1452747..1453490 (-) 744 WP_011226469.1 amino acid ABC transporter ATP-binding protein Regulator
  H1W74_RS07495 (STHERMO_1698) - 1453490..1454236 (-) 747 WP_095559509.1 amino acid ABC transporter permease -

Sequence


Protein


Download         Length: 358 a.a.        Molecular weight: 39202.09 Da        Isoelectric Point: 9.4944

>NTDB_id=1010744 H1W74_RS07465 WP_022096499.1 1449047..1450123(-) (sepM) [Streptococcus thermophilus isolate STH_CIRM_1047]
MANKTKSKSLLEKMWRIKWWLLSIFTVLFLLFALFFPLNNYYVELPGGAFDTKEVLTVNKKADDSKGSYNFVAVAQTKAT
LALMLYAQFNDFAKLQTAEEATGNYSDEDFMRINQFYMETSQNQAVYQGLTLAGKEVSLEYMGVYVLQVADDSSFKGVLN
IADTVTAVNGKTFDNSTDMIKYVQGLKLGSKVKVTYMRDGKEKTATGKIIKIANGKNGIGIGLTDHTEIKSPENVKFKLD
GVGGPSAGLMFTLAIYDQVSGQDLKAGRKIAGTGTIEKDGAVGDIGGAYLKVKSAADSGADIFFVPNNLVTKEMKKADPD
AKTNYQEAKEAAEKLGTKMKIVPVKTAQEAIDYLKKTK

Nucleotide


Download         Length: 1077 bp        

>NTDB_id=1010744 H1W74_RS07465 WP_022096499.1 1449047..1450123(-) (sepM) [Streptococcus thermophilus isolate STH_CIRM_1047]
GTGGCAAACAAGACAAAATCTAAATCGCTATTAGAGAAAATGTGGCGTATTAAGTGGTGGTTATTAAGTATTTTTACGGT
ACTTTTCCTCCTTTTTGCCCTCTTTTTCCCGCTCAATAATTACTATGTGGAGCTTCCGGGTGGTGCTTTTGATACCAAGG
AAGTCTTGACAGTGAATAAGAAAGCTGATGATTCTAAGGGCTCCTATAATTTTGTGGCGGTGGCTCAAACCAAGGCGACT
TTGGCCTTGATGCTCTATGCTCAGTTTAATGATTTTGCAAAGCTTCAAACGGCTGAAGAGGCAACTGGAAATTACTCTGA
TGAAGATTTCATGCGCATCAACCAATTTTACATGGAGACTTCTCAAAACCAAGCGGTTTATCAGGGCTTGACTCTGGCTG
GTAAGGAGGTTAGTTTGGAGTATATGGGTGTCTATGTGCTTCAGGTTGCTGATGATTCTAGCTTCAAGGGTGTCCTCAAT
ATTGCTGATACGGTGACGGCTGTTAATGGTAAGACCTTTGATAATTCTACTGACATGATTAAATACGTTCAAGGACTTAA
GCTGGGTTCAAAGGTCAAGGTCACTTATATGAGAGATGGCAAAGAAAAGACTGCTACTGGTAAGATTATTAAGATTGCCA
ATGGCAAAAATGGTATTGGTATCGGCCTAACGGACCATACTGAGATCAAGAGTCCTGAGAATGTTAAGTTTAAACTGGAT
GGTGTCGGTGGGCCAAGTGCTGGTCTTATGTTTACCTTGGCTATTTACGATCAGGTGTCTGGTCAAGACCTCAAGGCTGG
CCGCAAGATTGCTGGTACAGGAACTATTGAAAAAGATGGGGCTGTCGGTGATATCGGTGGGGCCTATCTCAAGGTGAAAT
CTGCGGCTGATAGTGGCGCAGACATTTTCTTCGTGCCAAATAATCTAGTAACTAAGGAAATGAAAAAGGCTGATCCGGAT
GCCAAGACTAATTATCAAGAGGCCAAGGAAGCTGCCGAGAAACTGGGGACCAAGATGAAAATCGTCCCTGTTAAAACAGC
TCAAGAAGCCATTGATTATTTGAAAAAGACTAAATGA

Domains


Predicted by InterProScan.

(137-206)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

63.05

95.251

0.601