Detailed information NTG1010484

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: ABOD76_RS12540
• Genome accession: NZ_CP158299
• Coordinates: 1480008..1481081 (-)
• Length: 357 a.a.
• NCBI ID: WP_350245192.1
• Uniprot ID: A0AAU7UF35
• Organism: Deinococcus sonorensis KR-87
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1475008..1486081

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABOD76_RS12515 (ABOD76_12470)	aceF	1475420..1477246 (+)	1827	WP_350245187.1	dihydrolipoyllysine-residue acetyltransferase	-
ABOD76_RS12520 (ABOD76_12475)	-	1477438..1478514 (+)	1077	WP_350245188.1	HAMP domain-containing sensor histidine kinase	-
ABOD76_RS12525 (ABOD76_12480)	-	1478511..1479095 (+)	585	WP_350245189.1	response regulator transcription factor	-
ABOD76_RS12530 (ABOD76_12485)	-	1479147..1479605 (-)	459	WP_350245190.1	hypothetical protein	-
ABOD76_RS12535 (ABOD76_12490)	-	1479710..1480003 (+)	294	WP_350245191.1	hypothetical protein	-
ABOD76_RS12540 (ABOD76_12495)	dprA	1480008..1481081 (-)	1074	WP_350245192.1	DNA-processing protein DprA	Machinery gene
ABOD76_RS12545 (ABOD76_12500)	-	1481134..1481754 (-)	621	WP_350245193.1	YigZ family protein	-
ABOD76_RS12550 (ABOD76_12505)	-	1481751..1482341 (-)	591	WP_350245194.1	NUDIX hydrolase	-
ABOD76_RS12555 (ABOD76_12510)	-	1482436..1484187 (+)	1752	WP_350245195.1	N-acetylmuramoyl-L-alanine amidase	-
ABOD76_RS12560 (ABOD76_12515)	-	1484258..1485523 (+)	1266	WP_350245197.1	pitrilysin family protein	-

Sequence

Protein

• Length: 357 a.a.
• Molecular weight: 37291.59 Da
• Isoelectric Point: 6.6130

>NTDB_id=1010484 ABOD76_RS12540 WP_350245192.1 1480008..1481081(-) (dprA) [Deinococcus sonorensis KR-87]
MTAYDPELLALLTLRFTPGLGPRRTEALRRACGSAQAVLRARPEQLRAVPGLDARSLAALSTPDAASERARRELDNAATF
GATLLGRGLPGYPEALEALGDPPAVLWLRGTLPELATVPRAIGVVGTRKASSSALQLSARISAELARASVVVVSGLARGI
DTAAHTAAVQAGGESIGILGSGLDQLYPPENRALAAQLTVLSEYPLGTRPAAHNFPGRNRLIAALSAGSLVVEGERTSGA
MITATHALECGRTVFAVPGRAGDPLAQGPHQLLREGAVLTEHAQDILDELGWSGPGALPAPELPADQARVWGELAQPATL
DDLLSRTGLPHPELQMALMMLQLGGHLDEQAGRYLRR

Nucleotide

• Length: 1074 bp

>NTDB_id=1010484 ABOD76_RS12540 WP_350245192.1 1480008..1481081(-) (dprA) [Deinococcus sonorensis KR-87]
ATGACCGCCTACGACCCGGAACTGCTGGCGCTGCTGACCCTGCGCTTCACGCCGGGCCTGGGGCCACGGCGCACCGAAGC
GCTGCGGCGTGCCTGCGGGTCGGCCCAGGCGGTGCTGCGCGCCCGGCCGGAGCAGCTGCGCGCGGTGCCGGGGCTGGATG
CCCGCTCGCTGGCCGCGCTGAGCACCCCGGATGCAGCCAGCGAGCGGGCCCGCCGCGAGCTGGACAACGCGGCCACCTTC
GGGGCCACGCTGCTGGGACGGGGCCTGCCCGGGTATCCGGAAGCGCTGGAGGCGCTGGGCGATCCGCCGGCGGTGCTGTG
GCTGCGCGGCACGCTGCCGGAGCTGGCCACCGTGCCGCGCGCCATCGGGGTGGTGGGCACCCGCAAGGCCAGCAGTTCCG
CACTGCAGCTCAGCGCGCGGATCAGCGCCGAACTGGCCCGTGCCAGCGTGGTGGTGGTGTCGGGGCTGGCGCGCGGCATC
GACACCGCGGCGCACACGGCGGCGGTGCAGGCGGGCGGCGAGAGCATCGGCATTCTGGGCAGCGGCCTGGACCAGCTGTA
CCCGCCGGAGAACCGGGCGCTGGCGGCGCAGCTGACCGTGCTGAGCGAGTATCCGCTCGGCACCCGGCCGGCGGCCCACA
ACTTTCCGGGGCGCAACCGCCTGATTGCGGCGCTGTCGGCCGGCAGCCTGGTGGTGGAGGGGGAGCGGACCAGCGGCGCC
ATGATCACGGCCACCCACGCGCTGGAGTGTGGCCGCACCGTGTTCGCGGTGCCGGGCCGGGCCGGCGACCCGCTGGCGCA
GGGACCGCATCAGCTGCTGCGCGAGGGCGCAGTGCTGACCGAGCACGCCCAGGACATCCTGGACGAGCTGGGCTGGAGCG
GCCCTGGAGCGTTGCCCGCGCCCGAGCTGCCGGCCGATCAGGCGCGGGTCTGGGGCGAGCTGGCGCAGCCGGCCACTTTG
GACGACCTGCTGTCGCGCACCGGCCTGCCCCACCCGGAACTGCAGATGGCCCTGATGATGCTGCAGCTTGGCGGTCACCT
GGACGAGCAGGCGGGCCGTTACCTGCGCCGCTGA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (82-280)

• DprA winged helix domain (DprA_WH) (298-352)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	62.784	98.599	0.619
dprA	Vibrio cholerae strain A1552	36.87	100	0.389
dprA	Vibrio campbellii strain DS40M4	36.193	100	0.378