Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   H1W98_RS05580 Genome accession   NZ_LR822026
Coordinates   1058383..1058865 (-) Length   160 a.a.
NCBI ID   WP_101415632.1    Uniprot ID   -
Organism   Streptococcus thermophilus isolate STH_CIRM_967     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1053383..1063865
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H1W98_RS05560 (STHERMO_1252) pepT 1053864..1055087 (-) 1224 WP_179971923.1 peptidase T -
  H1W98_RS05565 (STHERMO_1253) lepB 1055295..1055852 (-) 558 WP_179971924.1 signal peptidase I -
  H1W98_RS05570 (STHERMO_1254) - 1055975..1057204 (-) 1230 WP_179973773.1 tetratricopeptide repeat protein -
  H1W98_RS05575 (STHERMO_1255) - 1057194..1058372 (-) 1179 WP_101415631.1 AI-2E family transporter -
  H1W98_RS05580 (STHERMO_1256) mutX 1058383..1058865 (-) 483 WP_101415632.1 NUDIX hydrolase Machinery gene
  H1W98_RS05585 (STHERMO_1257) ftsX 1059019..1059948 (-) 930 WP_011681194.1 permease-like cell division protein FtsX -
  H1W98_RS05590 (STHERMO_1258) ftsE 1059941..1060633 (-) 693 WP_179973007.1 cell division ATP-binding protein FtsE -
  H1W98_RS05600 (STHERMO_1260) queG 1061872..1062990 (-) 1119 WP_179971928.1 tRNA epoxyqueuosine(34) reductase QueG -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18923.35 Da        Isoelectric Point: 4.6450

>NTDB_id=1010293 H1W98_RS05580 WP_101415632.1 1058383..1058865(-) (mutX) [Streptococcus thermophilus isolate STH_CIRM_967]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREIFEETHLTVKEMDFKGMITFPEFTPGH
DWYTYVFKVTDFEGKLISDEESREGTLEWVPYDQVLTKQTWEGDYEIFKWILEDKPFFSAKFSYDRNQNLIDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=1010293 H1W98_RS05580 WP_101415632.1 1058383..1058865(-) (mutX) [Streptococcus thermophilus isolate STH_CIRM_967]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGGAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTCGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTTTCGAGGAAACTCATTTGACAGTGAAGGAGATGGACTTCAAAGGTATGATTACCTTCCCAGAATTTACTCCGGGCCAC
GATTGGTATACTTATGTCTTTAAGGTGACTGATTTTGAAGGGAAACTCATTTCTGATGAGGAATCTCGTGAAGGGACACT
TGAATGGGTACCATATGATCAGGTTTTAACTAAACAAACCTGGGAAGGTGACTATGAGATTTTTAAGTGGATTCTAGAAG
ATAAACCTTTCTTCTCTGCAAAATTTAGCTACGATCGTAACCAAAACTTGATAGATAAAACTGTAACATTCTATGATAAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706