Detailed information    

insolico Bioinformatically predicted

Overview


Name   recX   Type   Regulator
Locus tag   ABOA58_RS23675 Genome accession   NZ_CP158190
Coordinates   4799153..4799950 (-) Length   265 a.a.
NCBI ID   WP_350300266.1    Uniprot ID   -
Organism   Peribacillus frigoritolerans strain LSJ146     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context


Location: 4794153..4804950
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABOA58_RS23635 (ABOA58_23580) - 4794275..4794550 (-) 276 WP_350300263.1 gamma-type small acid-soluble spore protein -
  ABOA58_RS23640 (ABOA58_23585) fabL 4794633..4795382 (-) 750 WP_230178804.1 enoyl-[acyl-carrier-protein] reductase FabL -
  ABOA58_RS23645 (ABOA58_23590) - 4795451..4795675 (+) 225 WP_061461732.1 hypothetical protein -
  ABOA58_RS23650 (ABOA58_23595) mutY 4795831..4796949 (-) 1119 WP_350300264.1 A/G-specific adenine glycosylase -
  ABOA58_RS23655 (ABOA58_23600) - 4797156..4798133 (+) 978 WP_350300265.1 metal-dependent hydrolase -
  ABOA58_RS23660 (ABOA58_23605) - 4798189..4798455 (-) 267 WP_034305384.1 YfhJ family protein -
  ABOA58_RS23665 (ABOA58_23610) - 4798569..4798724 (+) 156 WP_034305387.1 small, acid-soluble spore protein K -
  ABOA58_RS23670 (ABOA58_23615) - 4798766..4799077 (-) 312 WP_063234815.1 YfhH family protein -
  ABOA58_RS23675 (ABOA58_23620) recX 4799153..4799950 (-) 798 WP_350300266.1 recombination regulator RecX Regulator
  ABOA58_RS23680 (ABOA58_23625) - 4800076..4800996 (+) 921 WP_350302959.1 TIGR01777 family oxidoreductase -
  ABOA58_RS23685 (ABOA58_23630) - 4801050..4801172 (+) 123 WP_081088510.1 YfhE family protein -
  ABOA58_RS23690 (ABOA58_23635) - 4801280..4801465 (+) 186 WP_350300267.1 YfhD family protein -
  ABOA58_RS23695 (ABOA58_23640) - 4801854..4803434 (-) 1581 WP_350300268.1 fatty acid--CoA ligase -
  ABOA58_RS23700 (ABOA58_23645) - 4803567..4804718 (-) 1152 WP_350300269.1 thiolase family protein -

Sequence


Protein


Download         Length: 265 a.a.        Molecular weight: 31360.91 Da        Isoelectric Point: 6.9846

>NTDB_id=1010245 ABOA58_RS23675 WP_350300266.1 4799153..4799950(-) (recX) [Peribacillus frigoritolerans strain LSJ146]
MPNITKITTQKKRKDRFNIFVDEKYAFSVDEEVLLKFHLKKGMELDDLLLAEIQFHDEIQKAFTDALNYLSYRMRSESEI
RLYLKKKETEEPIIKEAIHKLYSFNYLDDLEFAKAYVRTHVNGGNKGPTTLKLELKEKGVQEKLVVEALKEYPYDIQIEH
ASKLAGKAVKKEKNISERALRLKVEQTLLRKGFPRDVIHEALEDVTVEKDEDEQWDSLCHHAEKMQRRYKNHEGFEYEQK
MKQALYRKGFPIELIERYLSNADGD

Nucleotide


Download         Length: 798 bp        

>NTDB_id=1010245 ABOA58_RS23675 WP_350300266.1 4799153..4799950(-) (recX) [Peribacillus frigoritolerans strain LSJ146]
ATGCCAAACATAACAAAAATAACAACCCAAAAGAAACGTAAAGATCGTTTTAACATTTTCGTTGACGAAAAATATGCCTT
CAGTGTAGATGAAGAAGTGCTATTGAAATTTCATTTGAAAAAGGGTATGGAACTTGATGACCTGCTTTTGGCTGAAATAC
AATTCCATGATGAAATCCAAAAAGCATTTACCGATGCACTTAATTATTTATCATACCGGATGCGCTCGGAATCGGAAATT
CGCCTTTATTTAAAAAAGAAGGAAACGGAAGAGCCGATCATTAAGGAAGCGATACATAAACTTTACAGCTTTAACTATTT
AGACGACCTTGAATTTGCCAAGGCTTACGTACGGACCCATGTGAATGGAGGCAATAAAGGGCCCACTACCCTTAAGCTCG
AGCTTAAGGAAAAAGGGGTGCAAGAAAAGTTGGTTGTCGAGGCATTGAAGGAATACCCCTATGATATTCAGATTGAACAT
GCAAGCAAACTTGCTGGAAAAGCGGTCAAAAAGGAAAAAAACATTTCCGAACGAGCTTTAAGGCTGAAGGTTGAACAAAC
CTTGTTACGGAAAGGCTTCCCTAGAGATGTCATCCATGAAGCACTTGAAGATGTGACGGTTGAAAAGGATGAAGATGAAC
AATGGGATTCTCTTTGCCACCATGCCGAAAAAATGCAACGTCGATATAAAAACCATGAAGGCTTCGAATATGAACAAAAA
ATGAAGCAGGCATTATACCGAAAAGGTTTTCCAATAGAATTGATTGAGCGTTATCTTTCCAATGCAGATGGGGATTAA

Domains


Predicted by InterproScan.

(84-204)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

49.807

97.736

0.487


Multiple sequence alignment