Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   ABOA58_RS06845 Genome accession   NZ_CP158190
Coordinates   1387842..1388024 (+) Length   60 a.a.
NCBI ID   WP_034314525.1    Uniprot ID   A0A223EEA0
Organism   Peribacillus frigoritolerans strain LSJ146     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1382842..1393024
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABOA58_RS06830 (ABOA58_06815) - 1385478..1385669 (-) 192 WP_350301735.1 YjzD family protein -
  ABOA58_RS06835 (ABOA58_06820) - 1385965..1386687 (+) 723 WP_350301736.1 hydrolase -
  ABOA58_RS06840 (ABOA58_06825) - 1386790..1387623 (+) 834 WP_350301737.1 hypothetical protein -
  ABOA58_RS06845 (ABOA58_06830) comZ 1387842..1388024 (+) 183 WP_034314525.1 ComZ family protein Regulator
  ABOA58_RS06850 (ABOA58_06835) - 1388067..1388288 (-) 222 WP_350301738.1 hypothetical protein -
  ABOA58_RS06855 (ABOA58_06840) - 1388492..1389427 (+) 936 WP_350301739.1 beta-ketoacyl-ACP synthase III -
  ABOA58_RS06860 (ABOA58_06845) fabF 1389479..1390717 (+) 1239 WP_350301740.1 beta-ketoacyl-ACP synthase II -
  ABOA58_RS06865 (ABOA58_06850) - 1390854..1391624 (+) 771 WP_350301741.1 DUF2268 domain-containing putative Zn-dependent protease -
  ABOA58_RS06870 (ABOA58_06855) - 1391733..1392488 (+) 756 WP_034314514.1 YjbA family protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6845.97 Da        Isoelectric Point: 4.4566

>NTDB_id=1010219 ABOA58_RS06845 WP_034314525.1 1387842..1388024(+) (comZ) [Peribacillus frigoritolerans strain LSJ146]
MSSDKTLEFMGIAMKYFPEAKAKLEASGIPFSMEMAEPFMELFKSVMQEAYELGKQDAQR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=1010219 ABOA58_RS06845 WP_034314525.1 1387842..1388024(+) (comZ) [Peribacillus frigoritolerans strain LSJ146]
ATGAGTTCAGATAAAACTCTTGAATTTATGGGAATCGCCATGAAATACTTCCCAGAGGCTAAAGCGAAGCTTGAAGCAAG
CGGGATTCCATTCTCGATGGAGATGGCAGAGCCATTCATGGAGCTCTTTAAAAGCGTTATGCAAGAAGCTTATGAGCTTG
GTAAACAAGATGCTCAGCGTTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A223EEA0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

64.407

98.333

0.633

Multiple sequence alignment