Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   H1X08_RS04605 Genome accession   NZ_LR822025
Coordinates   905502..905984 (+) Length   160 a.a.
NCBI ID   WP_101415632.1    Uniprot ID   -
Organism   Streptococcus thermophilus isolate STH_CIRM_961     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 900502..910984
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H1X08_RS04585 (STHERMO_1026) queG 901377..902495 (+) 1119 WP_179971928.1 tRNA epoxyqueuosine(34) reductase QueG -
  H1X08_RS04590 (STHERMO_1027) prfB 902548..903649 (+) 1102 WP_180482605.1 peptide chain release factor 2 -
  H1X08_RS04595 (STHERMO_1028) ftsE 903734..904426 (+) 693 WP_179973007.1 cell division ATP-binding protein FtsE -
  H1X08_RS04600 (STHERMO_1029) ftsX 904419..905348 (+) 930 WP_011681194.1 permease-like cell division protein FtsX -
  H1X08_RS04605 (STHERMO_1030) mutX 905502..905984 (+) 483 WP_101415632.1 NUDIX hydrolase Machinery gene
  H1X08_RS04610 (STHERMO_1031) - 905995..907173 (+) 1179 WP_101415631.1 AI-2E family transporter -
  H1X08_RS04615 (STHERMO_1032) - 907163..908392 (+) 1230 WP_179973773.1 tetratricopeptide repeat protein -
  H1X08_RS04620 (STHERMO_1033) lepB 908515..909072 (+) 558 WP_179971924.1 signal peptidase I -
  H1X08_RS04625 (STHERMO_1035) pepT 909280..910503 (+) 1224 WP_179971923.1 peptidase T -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18923.35 Da        Isoelectric Point: 4.6450

>NTDB_id=1010181 H1X08_RS04605 WP_101415632.1 905502..905984(+) (mutX) [Streptococcus thermophilus isolate STH_CIRM_961]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREIFEETHLTVKEMDFKGMITFPEFTPGH
DWYTYVFKVTDFEGKLISDEESREGTLEWVPYDQVLTKQTWEGDYEIFKWILEDKPFFSAKFSYDRNQNLIDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=1010181 H1X08_RS04605 WP_101415632.1 905502..905984(+) (mutX) [Streptococcus thermophilus isolate STH_CIRM_961]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGGAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTCGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTTTCGAGGAAACTCATTTGACAGTGAAGGAGATGGACTTCAAAGGTATGATTACCTTCCCAGAATTTACTCCGGGCCAC
GATTGGTATACTTATGTCTTTAAGGTGACTGATTTTGAAGGGAAACTCATTTCTGATGAGGAATCTCGTGAAGGGACACT
TGAATGGGTACCATATGATCAGGTTTTAACTAAACAAACCTGGGAAGGTGACTATGAGATTTTTAAGTGGATTCTAGAAG
ATAAACCTTTCTTCTCTGCAAAATTTAGCTACGATCGTAACCAAAACTTGATAGATAAAACTGTAACATTCTATGATAAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706

Multiple sequence alignment