Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | ABNG17_RS19990 | Genome accession | NZ_CP158181 |
| Coordinates | 3754363..3754653 (-) | Length | 96 a.a. |
| NCBI ID | WP_087975202.1 | Uniprot ID | - |
| Organism | Bacillus pumilus strain RI06-95 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3749363..3759653
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABNG17_RS19950 (ABNG17_19935) | - | 3749398..3749727 (+) | 330 | WP_012008640.1 | cyclic-di-AMP receptor | - |
| ABNG17_RS19955 (ABNG17_19940) | - | 3749740..3750180 (+) | 441 | WP_044140388.1 | DUF327 family protein | - |
| ABNG17_RS19960 (ABNG17_19945) | holB | 3750192..3751181 (+) | 990 | WP_212046565.1 | DNA polymerase III subunit delta' | - |
| ABNG17_RS19965 (ABNG17_19950) | - | 3751184..3752011 (+) | 828 | WP_003217932.1 | stage 0 sporulation family protein | - |
| ABNG17_RS19970 (ABNG17_19955) | yabA | 3752026..3752379 (+) | 354 | WP_003217957.1 | DNA replication initiation control protein YabA | - |
| ABNG17_RS19975 (ABNG17_19960) | - | 3752435..3753178 (+) | 744 | WP_044140390.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| ABNG17_RS19980 (ABNG17_19965) | - | 3753165..3753461 (+) | 297 | WP_003217970.1 | GIY-YIG nuclease family protein | - |
| ABNG17_RS19985 (ABNG17_19970) | rsmI | 3753439..3754317 (+) | 879 | WP_050945799.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| ABNG17_RS19990 (ABNG17_19975) | abrB | 3754363..3754653 (-) | 291 | WP_087975202.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| ABNG17_RS19995 (ABNG17_19980) | metG | 3755174..3757165 (+) | 1992 | WP_050945798.1 | methionine--tRNA ligase | - |
| ABNG17_RS20000 (ABNG17_19985) | - | 3757247..3758014 (+) | 768 | WP_050945797.1 | TatD family hydrolase | - |
| ABNG17_RS20005 (ABNG17_19990) | - | 3758259..3759461 (+) | 1203 | WP_050945796.1 | G5 and 3D domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10853.65 Da Isoelectric Point: 7.9655
>NTDB_id=1010162 ABNG17_RS19990 WP_087975202.1 3754363..3754653(-) (abrB) [Bacillus pumilus strain RI06-95]
MKMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLANGKLVLSREG
AEQIINEIQNQLQSQK
MKMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLANGKLVLSREG
AEQIINEIQNQLQSQK
Nucleotide
Download Length: 291 bp
>NTDB_id=1010162 ABNG17_RS19990 WP_087975202.1 3754363..3754653(-) (abrB) [Bacillus pumilus strain RI06-95]
ATGAAGATGAAATCTACAGGTATTGTACGTAAAGTTGACGAATTAGGGCGCGTGGTGATTCCAATCGAACTTCGCCGTAC
TCTAGGTATCGCTGAAAAAGACGCTTTGGAAATTTATGTTGATGATGAAAAAATTATCCTAAAAAAATATAAACCAAACA
TGACTTGCCAAGTTACAGGTGAAGTATCAGACGATAACCTTAAACTTGCTAATGGTAAATTAGTTCTTAGCCGTGAAGGT
GCAGAGCAAATCATTAACGAAATCCAAAACCAACTTCAATCACAAAAATAA
ATGAAGATGAAATCTACAGGTATTGTACGTAAAGTTGACGAATTAGGGCGCGTGGTGATTCCAATCGAACTTCGCCGTAC
TCTAGGTATCGCTGAAAAAGACGCTTTGGAAATTTATGTTGATGATGAAAAAATTATCCTAAAAAAATATAAACCAAACA
TGACTTGCCAAGTTACAGGTGAAGTATCAGACGATAACCTTAAACTTGCTAATGGTAAATTAGTTCTTAGCCGTGAAGGT
GCAGAGCAAATCATTAACGAAATCCAAAACCAACTTCAATCACAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
93.75 |
100 |
0.938 |