Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | ABNG17_RS08860 | Genome accession | NZ_CP158181 |
| Coordinates | 1661307..1661687 (+) | Length | 126 a.a. |
| NCBI ID | WP_223251181.1 | Uniprot ID | - |
| Organism | Bacillus pumilus strain RI06-95 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 1656307..1666687
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABNG17_RS08850 (ABNG17_08850) | - | 1656598..1659741 (+) | 3144 | WP_137054582.1 | bifunctional cytochrome P450/NADPH--P450 reductase | - |
| ABNG17_RS08855 (ABNG17_08855) | - | 1660136..1661044 (+) | 909 | WP_226805234.1 | trypsin-like serine protease | - |
| ABNG17_RS08860 (ABNG17_08860) | nucA/comI | 1661307..1661687 (+) | 381 | WP_223251181.1 | NucA/NucB deoxyribonuclease domain-containing protein | Machinery gene |
| ABNG17_RS08865 (ABNG17_08865) | - | 1661836..1662684 (+) | 849 | WP_044141412.1 | STAS domain-containing protein | - |
| ABNG17_RS08870 (ABNG17_08870) | - | 1662717..1663259 (-) | 543 | WP_003211360.1 | IseA DL-endopeptidase inhibitor family protein | - |
| ABNG17_RS08875 (ABNG17_08875) | - | 1663554..1663988 (+) | 435 | WP_003212431.1 | hypothetical protein | - |
| ABNG17_RS08880 (ABNG17_08880) | lexA | 1664034..1664654 (-) | 621 | WP_003212311.1 | transcriptional repressor LexA | - |
| ABNG17_RS08885 (ABNG17_08885) | yneA | 1664814..1665125 (+) | 312 | WP_003211955.1 | cell division suppressor protein YneA | - |
| ABNG17_RS08890 (ABNG17_08890) | - | 1665143..1665790 (+) | 648 | WP_003211322.1 | recombinase family protein | - |
| ABNG17_RS08895 (ABNG17_08895) | - | 1665860..1666090 (+) | 231 | WP_003211509.1 | DUF896 domain-containing protein | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13785.42 Da Isoelectric Point: 7.3831
>NTDB_id=1010129 ABNG17_RS08860 WP_223251181.1 1661307..1661687(+) (nucA/comI) [Bacillus pumilus strain RI06-95]
MGTLLGGFGEEHAAKGADRYDHVIQFPKERYPETGSHIQEAIRKGHSDVCTIDRNGADARRQESLKGIPTKPGFDRDEWP
MAVCLEGGKGASVQYVSPSDNRGAGSWVGHQMSGYPDGKRILFIVK
MGTLLGGFGEEHAAKGADRYDHVIQFPKERYPETGSHIQEAIRKGHSDVCTIDRNGADARRQESLKGIPTKPGFDRDEWP
MAVCLEGGKGASVQYVSPSDNRGAGSWVGHQMSGYPDGKRILFIVK
Nucleotide
Download Length: 381 bp
>NTDB_id=1010129 ABNG17_RS08860 WP_223251181.1 1661307..1661687(+) (nucA/comI) [Bacillus pumilus strain RI06-95]
ATGGGCACGCTGCTAGGTGGATTTGGGGAGGAACATGCGGCAAAAGGTGCGGATCGATATGATCATGTCATTCAATTTCC
AAAGGAACGGTACCCTGAAACTGGCAGTCATATTCAAGAAGCCATTCGAAAAGGGCATTCAGATGTGTGTACGATAGACC
GAAATGGAGCAGATGCCCGCAGGCAAGAATCATTAAAAGGCATTCCGACTAAGCCTGGATTCGACCGAGATGAGTGGCCG
ATGGCAGTTTGTCTTGAAGGAGGAAAAGGGGCGAGTGTTCAATATGTCAGTCCGTCTGATAATAGGGGAGCGGGCTCATG
GGTCGGACACCAGATGAGCGGGTATCCTGATGGGAAAAGAATTTTATTTATTGTGAAATAA
ATGGGCACGCTGCTAGGTGGATTTGGGGAGGAACATGCGGCAAAAGGTGCGGATCGATATGATCATGTCATTCAATTTCC
AAAGGAACGGTACCCTGAAACTGGCAGTCATATTCAAGAAGCCATTCGAAAAGGGCATTCAGATGTGTGTACGATAGACC
GAAATGGAGCAGATGCCCGCAGGCAAGAATCATTAAAAGGCATTCCGACTAAGCCTGGATTCGACCGAGATGAGTGGCCG
ATGGCAGTTTGTCTTGAAGGAGGAAAAGGGGCGAGTGTTCAATATGTCAGTCCGTCTGATAATAGGGGAGCGGGCTCATG
GGTCGGACACCAGATGAGCGGGTATCCTGATGGGAAAAGAATTTTATTTATTGTGAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
57.983 |
94.444 |
0.548 |