Detailed information
Bioinformatically predicted
Overview
| Name | comK | Type | Regulator |
| Locus tag | ABNG17_RS05370 | Genome accession | NZ_CP158181 |
| Coordinates | 983469..984047 (+) | Length | 192 a.a. |
| NCBI ID | WP_003212419.1 | Uniprot ID | - |
| Organism | Bacillus pumilus strain RI06-95 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 978469..989047
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABNG17_RS05350 (ABNG17_05350) | - | 978961..980256 (-) | 1296 | WP_003211980.1 | globin-coupled sensor protein | - |
| ABNG17_RS05355 (ABNG17_05355) | - | 980348..981880 (-) | 1533 | WP_003211807.1 | FAD-dependent oxidoreductase | - |
| ABNG17_RS05360 (ABNG17_05360) | - | 982026..982886 (+) | 861 | WP_340865817.1 | SDR family oxidoreductase | - |
| ABNG17_RS05365 (ABNG17_05365) | - | 982950..983180 (-) | 231 | WP_003210924.1 | IDEAL domain-containing protein | - |
| ABNG17_RS05370 (ABNG17_05370) | comK | 983469..984047 (+) | 579 | WP_003212419.1 | competence protein ComK | Regulator |
| ABNG17_RS05375 (ABNG17_05375) | - | 984206..985312 (+) | 1107 | WP_050945377.1 | D-TA family PLP-dependent enzyme | - |
| ABNG17_RS05380 (ABNG17_05380) | - | 985628..986110 (+) | 483 | WP_003211388.1 | hypothetical protein | - |
| ABNG17_RS05385 (ABNG17_05385) | - | 986142..987581 (-) | 1440 | WP_350303786.1 | PLP-dependent aminotransferase family protein | - |
| ABNG17_RS05390 (ABNG17_05390) | - | 987726..988895 (+) | 1170 | WP_350303787.1 | MFS transporter | - |
Sequence
Protein
Download Length: 192 a.a. Molecular weight: 22376.45 Da Isoelectric Point: 8.7996
>NTDB_id=1010111 ABNG17_RS05370 WP_003212419.1 983469..984047(+) (comK) [Bacillus pumilus strain RI06-95]
MSGISETPLDSYVINQTTMAILPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHTFQESSLGDTVVIFTNEQTVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNRY
MSGISETPLDSYVINQTTMAILPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHTFQESSLGDTVVIFTNEQTVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNRY
Nucleotide
Download Length: 579 bp
>NTDB_id=1010111 ABNG17_RS05370 WP_003212419.1 983469..984047(+) (comK) [Bacillus pumilus strain RI06-95]
GTGTCAGGAATTAGTGAAACACCTTTAGATTCATACGTCATTAATCAAACAACAATGGCGATCCTTCCGGTTGAAGAAGG
AAAAAGAGTATATTCAAAAGTCATAGAAAGAGAGACAAGCTTTTACGTTGAATTAAAACCTCTGCAAATTATTGAACGCA
GCTGCCGATTCTTCGGCTCAAGCTATGCAGGCAGAAAAGCGGGAACATATGAAGTAACAGGAATATCCCACAAGCCTCCA
ATTGTGATTGACTCATCCAATCATCTGTATTTCTTCCCAACCTATTCATCCAACCGTCCTCAGTGCGGCTGGATCTCCCA
CAAATACATTCATACCTTCCAGGAATCATCCCTCGGAGACACGGTGGTCATCTTTACAAATGAGCAAACCGTCAAACTCG
ATGTCTCATATAAGTCATTTGAGAGTCAGGTGCACAGAACAGCGTATCTCCGAACGAAATTTCAAGATCGCCTTGATGGT
GGTCTTCCTAAAAAACAAGAATTTATGCTGTATCCAAAGGAACAACAGCTCAACCTTGTATACGATTTTATATTAAGGGA
GCTTCGAAACAGATATTAA
GTGTCAGGAATTAGTGAAACACCTTTAGATTCATACGTCATTAATCAAACAACAATGGCGATCCTTCCGGTTGAAGAAGG
AAAAAGAGTATATTCAAAAGTCATAGAAAGAGAGACAAGCTTTTACGTTGAATTAAAACCTCTGCAAATTATTGAACGCA
GCTGCCGATTCTTCGGCTCAAGCTATGCAGGCAGAAAAGCGGGAACATATGAAGTAACAGGAATATCCCACAAGCCTCCA
ATTGTGATTGACTCATCCAATCATCTGTATTTCTTCCCAACCTATTCATCCAACCGTCCTCAGTGCGGCTGGATCTCCCA
CAAATACATTCATACCTTCCAGGAATCATCCCTCGGAGACACGGTGGTCATCTTTACAAATGAGCAAACCGTCAAACTCG
ATGTCTCATATAAGTCATTTGAGAGTCAGGTGCACAGAACAGCGTATCTCCGAACGAAATTTCAAGATCGCCTTGATGGT
GGTCTTCCTAAAAAACAAGAATTTATGCTGTATCCAAAGGAACAACAGCTCAACCTTGTATACGATTTTATATTAAGGGA
GCTTCGAAACAGATATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comK | Bacillus subtilis subsp. subtilis str. 168 |
60.938 |
100 |
0.609 |