Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   ABN702_RS13330 Genome accession   NZ_CP158164
Coordinates   2613077..2614045 (-) Length   322 a.a.
NCBI ID   WP_417897324.1    Uniprot ID   -
Organism   Bacillus sp. CSS-39     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2608077..2619045
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABN702_RS13305 (ABN702_13280) - 2609191..2609973 (-) 783 WP_417897319.1 DUF2268 domain-containing protein -
  ABN702_RS13310 (ABN702_13285) fabF 2610125..2611366 (-) 1242 WP_417897320.1 beta-ketoacyl-ACP synthase II -
  ABN702_RS13315 (ABN702_13290) - 2611407..2612339 (-) 933 WP_417897321.1 beta-ketoacyl-ACP synthase III -
  ABN702_RS13320 (ABN702_13295) - 2612598..2612846 (+) 249 WP_417897322.1 hypothetical protein -
  ABN702_RS13325 (ABN702_13300) - 2612888..2613076 (-) 189 WP_417897323.1 ComZ family protein -
  ABN702_RS13330 (ABN702_13305) med 2613077..2614045 (-) 969 WP_417897324.1 BMP family ABC transporter substrate-binding protein Regulator
  ABN702_RS13335 (ABN702_13310) - 2614172..2614960 (-) 789 WP_417897325.1 hypothetical protein -
  ABN702_RS13340 (ABN702_13315) - 2615050..2615787 (-) 738 WP_417897326.1 alpha/beta fold hydrolase -
  ABN702_RS13345 (ABN702_13320) - 2616111..2616236 (-) 126 WP_386641598.1 hypothetical protein -
  ABN702_RS13350 (ABN702_13325) - 2616408..2616590 (+) 183 WP_204416588.1 YjzD family protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35781.27 Da        Isoelectric Point: 4.1732

>NTDB_id=1010038 ABN702_RS13330 WP_417897324.1 2613077..2614045(-) (med) [Bacillus sp. CSS-39]
MKKPIWFILLVFLFLSACGQPDTETKLQKVGLLVPDSIDDQVWGTKGYKGLLRIQSEFGVDVFYEEGIHKEEEIIKAVKK
FENEGINLIFGHGSEYAKVFSEIGDEYPDIHFVCFNSDVSGDNVTSLNFKANAMGFFGGMVAGKMSKSNHIGIIAAFEWQ
PEVNGFFEGVLYENPDATVYIEYTQDWNDPELANSKLEKMLASGVDIVYPAGDGFNVPVINTLKDRGLFAIGFVSDQSDL
GENTVLTSTVQHVPALYELVAKRFLAGELEPGNSYFDFEDGVISLGTFSPLVSEDYQDDILDHIKNYKETGLLPNQTESG
KE

Nucleotide


Download         Length: 969 bp        

>NTDB_id=1010038 ABN702_RS13330 WP_417897324.1 2613077..2614045(-) (med) [Bacillus sp. CSS-39]
ATGAAAAAGCCAATATGGTTCATTCTTCTTGTTTTTCTCTTTTTATCTGCATGTGGACAACCTGATACCGAAACCAAGCT
TCAGAAGGTGGGACTGCTCGTACCTGACTCCATTGATGATCAAGTTTGGGGAACCAAAGGGTATAAAGGCCTTTTAAGGA
TACAGTCGGAATTTGGTGTAGATGTCTTTTATGAAGAAGGAATACATAAGGAAGAGGAAATCATCAAAGCGGTTAAAAAG
TTTGAAAATGAAGGAATCAATCTCATATTCGGTCATGGAAGTGAATATGCAAAAGTGTTCAGCGAAATAGGTGACGAATA
TCCAGACATTCACTTTGTTTGTTTTAATTCAGATGTAAGCGGGGATAATGTTACAAGCCTGAATTTCAAAGCAAATGCAA
TGGGATTTTTTGGTGGTATGGTTGCTGGAAAGATGTCGAAATCCAATCATATAGGAATCATTGCAGCTTTTGAATGGCAG
CCGGAAGTAAACGGTTTTTTTGAAGGTGTCCTTTATGAAAATCCGGATGCAACGGTCTACATAGAGTATACACAGGACTG
GAATGATCCTGAACTGGCCAATTCCAAGCTCGAAAAAATGCTGGCTAGTGGTGTGGACATTGTCTATCCTGCCGGCGATG
GGTTCAATGTTCCCGTTATCAACACATTAAAGGATAGAGGGCTTTTTGCCATTGGATTTGTATCCGACCAATCGGATTTA
GGGGAGAATACTGTACTGACAAGTACCGTTCAGCACGTCCCCGCCTTATATGAATTGGTGGCAAAGCGTTTTCTGGCAGG
TGAGCTTGAGCCGGGCAACAGCTATTTCGACTTTGAGGATGGAGTCATTTCCCTGGGCACTTTCAGTCCACTTGTCAGCG
AGGATTATCAAGATGACATACTGGATCATATCAAGAATTATAAGGAAACAGGCTTATTACCTAATCAGACAGAAAGTGGG
AAAGAATAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(28-315)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

55.414

97.516

0.54

Multiple sequence alignment