Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   ABN702_RS13190 Genome accession   NZ_CP158164
Coordinates   2583200..2583889 (-) Length   229 a.a.
NCBI ID   WP_417897297.1    Uniprot ID   -
Organism   Bacillus sp. CSS-39     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 2578200..2588889
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABN702_RS13180 (ABN702_13155) - 2580002..2581168 (-) 1167 WP_417897295.1 competence protein CoiA -
  ABN702_RS13185 (ABN702_13160) cls 2581618..2583126 (-) 1509 WP_417897296.1 cardiolipin synthase -
  ABN702_RS13190 (ABN702_13165) mecA 2583200..2583889 (-) 690 WP_417897297.1 adaptor protein MecA Regulator
  ABN702_RS13195 (ABN702_13170) - 2584302..2584961 (+) 660 WP_417897298.1 TerC family protein -
  ABN702_RS13200 (ABN702_13175) spxA 2585009..2585407 (-) 399 WP_078381419.1 transcriptional regulator SpxA -
  ABN702_RS13205 (ABN702_13180) - 2585824..2587041 (+) 1218 WP_417897299.1 efflux RND transporter periplasmic adaptor subunit -

Sequence


Protein


Download         Length: 229 a.a.        Molecular weight: 27272.37 Da        Isoelectric Point: 4.1352

>NTDB_id=1010035 ABN702_RS13190 WP_417897297.1 2583200..2583889(-) (mecA) [Bacillus sp. CSS-39]
MEIERINDHTVKFYISYGDIEERGFDREEIWYNRERSEELFWEMMDEAHDEEDFMVEGPLWIQVQALDKGLEVVVTRAQL
SKDGKNFEVPVSDDKKIDIPVDERIEALIDQHFNSNPKVDNKEDKLEEETDLLQFMIRFKDLEYIISVSHRLQHLENLNN
SLYFFEGSYYLYVDFSSEHYTDEDIDNVLSVLLEFGDESAMSIHRLQEYGSEVVKDTAMKEMTMHFPLK

Nucleotide


Download         Length: 690 bp        

>NTDB_id=1010035 ABN702_RS13190 WP_417897297.1 2583200..2583889(-) (mecA) [Bacillus sp. CSS-39]
ATGGAAATCGAACGGATTAATGATCATACGGTAAAATTTTATATTTCATATGGTGATATAGAGGAAAGAGGCTTTGACCG
CGAAGAAATCTGGTACAATCGTGAAAGAAGCGAAGAGCTATTCTGGGAAATGATGGATGAAGCCCACGATGAAGAAGATT
TTATGGTGGAAGGGCCATTGTGGATCCAGGTACAGGCTCTTGATAAAGGCTTGGAGGTAGTTGTGACAAGAGCTCAGCTT
TCCAAGGATGGGAAAAATTTTGAAGTTCCTGTTTCCGATGACAAAAAAATCGATATCCCTGTGGATGAGCGAATTGAAGC
TTTGATTGATCAGCATTTCAATTCCAACCCTAAAGTGGATAATAAAGAAGATAAGCTCGAAGAAGAAACAGATCTCTTGC
AATTCATGATCCGTTTCAAGGATCTCGAATATATTATTTCTGTCAGTCATCGTCTACAGCACTTGGAGAATTTAAATAAC
AGCCTCTACTTCTTCGAAGGCAGCTATTATTTATATGTTGATTTTTCCAGTGAGCATTACACGGATGAGGATATAGATAA
TGTGCTTAGTGTTCTTCTTGAGTTTGGGGATGAGTCGGCAATGAGCATTCATCGTCTCCAGGAGTATGGTTCCGAAGTTG
TAAAAGATACTGCAATGAAAGAAATGACCATGCATTTTCCACTTAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

57.826

100

0.581


Multiple sequence alignment