Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   H0510_RS05250 Genome accession   NZ_LR822019
Coordinates   990857..991339 (-) Length   160 a.a.
NCBI ID   WP_011226072.1    Uniprot ID   Q5M461
Organism   Streptococcus thermophilus isolate STH_CIRM_772     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 985857..996339
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H0510_RS05230 (STHERMO_1151) pepT 986337..987560 (-) 1224 WP_011226068.1 peptidase T -
  H0510_RS05235 (STHERMO_1152) lepB 987769..988326 (-) 558 WP_002953084.1 signal peptidase I -
  H0510_RS05240 (STHERMO_1153) - 988449..989678 (-) 1230 WP_179967085.1 tetratricopeptide repeat protein -
  H0510_RS05245 (STHERMO_1154) - 989668..990846 (-) 1179 WP_011227264.1 AI-2E family transporter -
  H0510_RS05250 (STHERMO_1155) mutX 990857..991339 (-) 483 WP_011226072.1 NUDIX hydrolase Machinery gene
  H0510_RS05255 (STHERMO_1156) ftsX 991495..992424 (-) 930 WP_179966650.1 permease-like cell division protein FtsX -
  H0510_RS05260 (STHERMO_1157) ftsE 992417..993109 (-) 693 WP_022096763.1 cell division ATP-binding protein FtsE -
  H0510_RS05270 (STHERMO_1159) queG 994348..995466 (-) 1119 WP_059257434.1 tRNA epoxyqueuosine(34) reductase QueG -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18869.36 Da        Isoelectric Point: 4.7200

>NTDB_id=1009853 H0510_RS05250 WP_011226072.1 990857..991339(-) (mutX) [Streptococcus thermophilus isolate STH_CIRM_772]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREIFEETHLTVKKMDFKGMITFPEFTPGH
DWYTYVFKVTDFEGKLISDEESREGTLEWVPYDQVLTKQTWEGDYEIFKWILEDKPFFSAKFSYDCNQNLIDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=1009853 H0510_RS05250 WP_011226072.1 990857..991339(-) (mutX) [Streptococcus thermophilus isolate STH_CIRM_772]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGGAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTCGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTTTCGAGGAAACTCATTTGACAGTGAAAAAGATGGACTTCAAAGGTATGATTACCTTCCCAGAATTTACTCCGGGCCAC
GATTGGTATACCTATGTCTTTAAGGTGACTGATTTTGAAGGAAAACTCATTTCTGATGAGGAATCTCGTGAAGGGACACT
TGAATGGGTACCATATGATCAGGTTTTAACTAAACAAACCTGGGAAGGTGACTATGAGATTTTTAAGTGGATTCTAGAAG
ATAAACCTTTCTTCTCTGCAAAATTTAGCTACGATTGTAACCAAAACTTGATAGATAAAACTGTAACATTTTATGATAAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5M461

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706