Detailed information
Bioinformatically predicted
Overview
| Name | exbB | Type | Machinery gene |
| Locus tag | P303_RS01220 | Genome accession | NZ_CP006740 |
| Coordinates | 251238..251900 (+) | Length | 220 a.a. |
| NCBI ID | WP_004085189.1 | Uniprot ID | Q9PEE9 |
| Organism | Xylella fastidiosa MUL0034 | ||
| Function | ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 246238..256900
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P303_RS01205 (P303_01240) | - | 246472..247713 (+) | 1242 | WP_038230151.1 | lipoprotein-releasing ABC transporter permease subunit | - |
| P303_RS01210 (P303_01245) | lolD | 247706..248428 (+) | 723 | WP_038230153.1 | lipoprotein-releasing ABC transporter ATP-binding protein LolD | - |
| P303_RS01215 (P303_01250) | comA | 248776..251253 (+) | 2478 | WP_038230158.1 | DNA internalization-related competence protein ComEC/Rec2 | Machinery gene |
| P303_RS01220 (P303_01255) | exbB | 251238..251900 (+) | 663 | WP_004085189.1 | MotA/TolQ/ExbB proton channel family protein | Machinery gene |
| P303_RS01225 (P303_01260) | - | 251905..252342 (+) | 438 | WP_004089267.1 | biopolymer transporter ExbD | - |
| P303_RS01230 (P303_01265) | msbA | 252360..254108 (+) | 1749 | WP_004089264.1 | lipid A export permease/ATP-binding protein MsbA | - |
| P303_RS01235 (P303_01270) | lpxK | 254105..255124 (+) | 1020 | WP_038230156.1 | tetraacyldisaccharide 4'-kinase | - |
| P303_RS01240 (P303_01275) | - | 255531..256220 (-) | 690 | WP_230577660.1 | contractile injection system protein, VgrG/Pvc8 family | - |
Sequence
Protein
Download Length: 220 a.a. Molecular weight: 24000.41 Da Isoelectric Point: 8.9727
>NTDB_id=100982 P303_RS01220 WP_004085189.1 251238..251900(+) (exbB) [Xylella fastidiosa MUL0034]
MLELVKAGGWPMLPLLMLGVVALAIVLERLWTLRRNEVLPSGLGREVREWVRRGKLDQNHLESLRRNSPLGALLAAALDV
KGGVREMIRERIEDTGRHLVHRMERFLNALGTIASAGPLLGLLGTVVGMIQMFLGILDYGVGDVNQLAGGIGKALVCTAT
GMIIAIPALIFHRYFKGRITGYVIEMEQEAMLLLDAIDGLQIAIQGRNAEVAHPNAVTKD
MLELVKAGGWPMLPLLMLGVVALAIVLERLWTLRRNEVLPSGLGREVREWVRRGKLDQNHLESLRRNSPLGALLAAALDV
KGGVREMIRERIEDTGRHLVHRMERFLNALGTIASAGPLLGLLGTVVGMIQMFLGILDYGVGDVNQLAGGIGKALVCTAT
GMIIAIPALIFHRYFKGRITGYVIEMEQEAMLLLDAIDGLQIAIQGRNAEVAHPNAVTKD
Nucleotide
Download Length: 663 bp
>NTDB_id=100982 P303_RS01220 WP_004085189.1 251238..251900(+) (exbB) [Xylella fastidiosa MUL0034]
ATGCTGGAACTGGTAAAGGCTGGCGGCTGGCCGATGTTGCCGCTGTTGATGTTAGGTGTTGTTGCATTGGCGATTGTGCT
TGAAAGGCTGTGGACTCTGCGTCGTAATGAGGTATTGCCGTCGGGGCTGGGTCGGGAGGTTCGTGAGTGGGTGAGGCGTG
GCAAATTGGACCAAAATCATCTTGAGTCTCTGCGCCGTAATTCTCCGCTTGGTGCGCTATTGGCCGCCGCTTTGGATGTA
AAAGGTGGCGTACGTGAAATGATTCGTGAACGTATTGAGGATACAGGGCGCCATCTGGTGCATCGCATGGAGCGTTTTCT
GAATGCACTCGGTACGATTGCTTCTGCAGGTCCTTTACTTGGTTTGCTAGGTACTGTGGTCGGTATGATTCAAATGTTCC
TGGGGATTCTCGATTATGGCGTGGGCGATGTGAATCAGCTTGCTGGAGGGATTGGCAAGGCATTGGTTTGCACTGCTACA
GGTATGATTATTGCGATTCCCGCTCTGATTTTTCATCGTTATTTCAAGGGGCGAATTACTGGGTACGTGATTGAGATGGA
GCAAGAGGCAATGCTCTTGCTGGATGCGATTGATGGTCTTCAGATTGCTATTCAAGGAAGAAATGCCGAAGTGGCGCACC
CCAATGCTGTCACCAAGGATTGA
ATGCTGGAACTGGTAAAGGCTGGCGGCTGGCCGATGTTGCCGCTGTTGATGTTAGGTGTTGTTGCATTGGCGATTGTGCT
TGAAAGGCTGTGGACTCTGCGTCGTAATGAGGTATTGCCGTCGGGGCTGGGTCGGGAGGTTCGTGAGTGGGTGAGGCGTG
GCAAATTGGACCAAAATCATCTTGAGTCTCTGCGCCGTAATTCTCCGCTTGGTGCGCTATTGGCCGCCGCTTTGGATGTA
AAAGGTGGCGTACGTGAAATGATTCGTGAACGTATTGAGGATACAGGGCGCCATCTGGTGCATCGCATGGAGCGTTTTCT
GAATGCACTCGGTACGATTGCTTCTGCAGGTCCTTTACTTGGTTTGCTAGGTACTGTGGTCGGTATGATTCAAATGTTCC
TGGGGATTCTCGATTATGGCGTGGGCGATGTGAATCAGCTTGCTGGAGGGATTGGCAAGGCATTGGTTTGCACTGCTACA
GGTATGATTATTGCGATTCCCGCTCTGATTTTTCATCGTTATTTCAAGGGGCGAATTACTGGGTACGTGATTGAGATGGA
GCAAGAGGCAATGCTCTTGCTGGATGCGATTGATGGTCTTCAGATTGCTATTCAAGGAAGAAATGCCGAAGTGGCGCACC
CCAATGCTGTCACCAAGGATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| exbB | Pseudomonas stutzeri DSM 10701 |
48.744 |
90.455 |
0.441 |