Detailed information NTG1009805

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ABFV67_RS01090
• Genome accession: NZ_CP158116
• Coordinates: 240374..241375 (+)
• Length: 333 a.a.
• NCBI ID: WP_004394443.1
• Uniprot ID: A0AAW8GWK2
• Organism: Vibrio metschnikovii strain IS021
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 235374..246375

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABFV67_RS01070 (ABFV67_01070)	metJ	235501..235818 (+)	318	WP_040903918.1	met regulon transcriptional regulator MetJ	-
ABFV67_RS01075 (ABFV67_01075)	-	235886..237172 (-)	1287	WP_004394440.1	malic enzyme-like NAD(P)-binding protein	-
ABFV67_RS01080 (ABFV67_01080)	rpmE	237396..237614 (-)	219	WP_004394441.1	50S ribosomal protein L31	-
ABFV67_RS01085 (ABFV67_01085)	priA	237860..240061 (+)	2202	WP_154169962.1	primosomal protein N'	-
ABFV67_RS01090 (ABFV67_01090)	cytR	240374..241375 (+)	1002	WP_004394443.1	DNA-binding transcriptional regulator CytR	Regulator
ABFV67_RS01095 (ABFV67_01095)	-	241496..242038 (+)	543	WP_332396405.1	SPOR domain-containing protein	-
ABFV67_RS01100 (ABFV67_01100)	hslV	242227..242781 (+)	555	WP_004394445.1	ATP-dependent protease subunit HslV	-
ABFV67_RS01105 (ABFV67_01105)	hslU	242820..244151 (+)	1332	WP_158145001.1	HslU--HslV peptidase ATPase subunit	-
ABFV67_RS01110 (ABFV67_01110)	-	244238..245155 (+)	918	WP_158138979.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ABFV67_RS01115 (ABFV67_01115)	rraA	245231..245749 (+)	519	WP_154169966.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 333 a.a.
• Molecular weight: 36633.26 Da
• Isoelectric Point: 6.6351

>NTDB_id=1009805 ABFV67_RS01090 WP_004394443.1 240374..241375(+) (cytR) [Vibrio metschnikovii strain IS021]
MATMKDVAQLAGVSTATVSRALMNPEKVSTTTRKRVEEAVLEAGYSPNSLARNLRRNESKTIVVIVPDICDPYYTEIIRG
IEDVAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGADLPFDVSKAEQKNLPPMVMACEYAPELELPTVHIDN
LTSAFEAVNYLTQMGHKKIAQISGPVGAVLCEFRQQGYQQALRRAGLVKNPTYTVVGDFSFESGAKAVRQLLALSEPPSA
IFCHNDAMAIGAMQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTICQPRYEIGRQTMLMMLELLRGRDVQAGSRLLE
THLVVRSSAAPPR

Nucleotide

• Length: 1002 bp

>NTDB_id=1009805 ABFV67_RS01090 WP_004394443.1 240374..241375(+) (cytR) [Vibrio metschnikovii strain IS021]
ATGGCGACAATGAAGGACGTTGCCCAGTTGGCAGGTGTCTCTACCGCGACGGTATCTCGTGCGTTGATGAATCCTGAGAA
AGTATCCACCACCACTCGTAAACGAGTGGAAGAAGCGGTACTTGAAGCTGGCTACTCCCCCAACTCTTTAGCGCGAAATC
TGCGCCGTAATGAATCAAAAACCATTGTGGTGATCGTGCCCGATATTTGTGACCCTTATTACACCGAGATCATTCGTGGT
ATCGAAGATGTGGCGATGGAGCATGGGTATTTGGTGCTGCTGGGTGACAGTGGTCAACAAAAGAAGCGTGAAAGCTCGTT
TGTGAACTTAGTCTTCACCAAGCAAGCCGACGGTATGTTATTGCTTGGTGCTGATCTGCCGTTTGATGTCAGTAAAGCGG
AACAGAAAAATCTGCCACCGATGGTGATGGCCTGTGAATATGCTCCGGAGTTAGAACTGCCGACGGTACATATTGATAAC
CTTACCTCAGCATTTGAGGCGGTGAACTACCTCACTCAGATGGGACATAAAAAAATTGCTCAAATCAGCGGGCCAGTAGG
TGCTGTGTTGTGTGAATTTCGTCAGCAAGGTTACCAGCAAGCACTGCGTAGAGCTGGATTGGTGAAAAACCCAACCTATA
CCGTTGTTGGTGACTTCTCTTTTGAATCCGGTGCTAAAGCGGTACGACAGTTATTAGCACTATCTGAGCCACCAAGTGCG
ATTTTTTGTCATAATGACGCGATGGCGATTGGGGCAATGCAAGAGGCGAAACGCTTAGGTTTACGAGTTCCGCAAGACTT
ATCCGTTGTGGGGTTTGATGATATTCAGTTTGCTCAGTATTGCGATCCACCGTTAACGACGATTTGTCAGCCACGTTATG
AAATTGGCCGACAAACGATGTTGATGATGCTTGAATTACTGCGAGGTCGAGATGTTCAGGCTGGATCACGGTTGTTAGAA
ACTCATCTGGTAGTGAGATCCAGCGCCGCGCCGCCAAGGTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	88.855	99.7	0.886
cytR	Vibrio parahaemolyticus RIMD 2210633	87.387	100	0.874