Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   ABJ384_RS13170 Genome accession   NZ_CP157981
Coordinates   2719251..2721473 (+) Length   740 a.a.
NCBI ID   WP_349927850.1    Uniprot ID   A0AAU7SWR8
Organism   Acinetobacter sp. A1-4-2     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2714251..2726473
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABJ384_RS13145 (ABJ384_13135) - 2714280..2715119 (+) 840 WP_349927843.1 CBS domain-containing protein -
  ABJ384_RS13150 (ABJ384_13140) lnt 2715116..2716675 (+) 1560 WP_349927845.1 apolipoprotein N-acyltransferase -
  ABJ384_RS13155 (ABJ384_13145) - 2716817..2717137 (-) 321 WP_349927847.1 hypothetical protein -
  ABJ384_RS13160 (ABJ384_13150) gspG 2717410..2717847 (-) 438 WP_086195245.1 type II secretion system major pseudopilin GspG -
  ABJ384_RS13165 (ABJ384_13155) gspF 2717893..2719098 (-) 1206 WP_166169485.1 type II secretion system inner membrane protein GspF -
  ABJ384_RS13170 (ABJ384_13160) priA 2719251..2721473 (+) 2223 WP_349927850.1 primosomal protein N' Machinery gene
  ABJ384_RS13175 (ABJ384_13165) - 2721533..2723374 (+) 1842 WP_349927852.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  ABJ384_RS13180 (ABJ384_13170) - 2723425..2724300 (+) 876 WP_349927854.1 Hsp33 family molecular chaperone HslO -
  ABJ384_RS13185 (ABJ384_13175) - 2724525..2724980 (+) 456 WP_300045826.1 DUF2147 domain-containing protein -
  ABJ384_RS13190 (ABJ384_13180) - 2725410..2725871 (+) 462 WP_180080149.1 DUF2147 domain-containing protein -

Sequence

Protein


Download         Length: 740 a.a.        Molecular weight: 84058.20 Da        Isoelectric Point: 9.1421

>NTDB_id=1009487 ABJ384_RS13170 WP_349927850.1 2719251..2721473(+) (priA) [Acinetobacter sp. A1-4-2]
MPNTPPIPADIYRIRVAVPVHLYDCFDYTLTAEQYQQAEVGARVAVSFGRQNLVGIIVEKLTADTPIDPRFKLKAITELL
DEQALLDQKILSLLTWSAQYYQFPIGEVFQSALPTFLRQGKPYNLLARLWKVLDLHAEDKLTRSEKQQQAYKVLKLHPQG
TTENILNLAGIETATLKALEKKAIVQCILEHQDFSPQPVTLAQMPLTANEDQKKAIQQVLKAQKKYQAFLLDGLTGSGKT
EVYLQIMQEVLKQGKQVLVLVPEIGLTPQTISRFQSRFHGNIVLLHSGLNDSKRLQAWQAAQTGKASIILGTRSAIYTPL
PNLGLIILDEEHDLSFKQQEGFRYHARDVAMYRAHLENCPIILGSATPSIDSYALVEMGKMTRLELSQRAGAAVMPKIHL
IDLKIAQKQNGMSQSLINEIQKRLDKKEQVLVFLNRRGYAPVLICESCAWQAKCPHCDANFTVHRQPYQHLHCHHCGSIH
RLPEQCPQCKHSELKPIGLGTAKVEENLQQLFPHFDVIRVDRDSTSRVGSWQKIYDKIQKSEPVILLGTQMLAKGHHFPY
VTLVAILDIDSGLLSVDFRATERTAQLIVQVAGRAGRGERKGEVYLQTLRPDHPLLNTLIDKDYRHFAKQTLKERQAAAL
PPFRYAALIRCESKNQEQNQEFLQQHAQALRQVSANLIDIWGPIPAPMERKAGRYQAHMVLLSQDRARLHFYIRAWWQNM
LHEKPSNMKLTLDIDPQELS

Nucleotide


Download         Length: 2223 bp        

>NTDB_id=1009487 ABJ384_RS13170 WP_349927850.1 2719251..2721473(+) (priA) [Acinetobacter sp. A1-4-2]
ATGCCAAATACACCACCGATTCCAGCCGACATTTATCGCATTCGTGTTGCCGTACCTGTACATCTCTATGACTGTTTTGA
CTACACCTTAACGGCTGAACAATATCAGCAAGCTGAAGTTGGGGCACGTGTGGCCGTGTCGTTTGGACGGCAAAATCTGG
TGGGCATTATTGTTGAAAAATTAACGGCCGATACCCCGATTGATCCACGTTTTAAGCTCAAAGCCATCACTGAACTACTG
GATGAACAAGCGCTTTTAGATCAAAAAATTTTAAGCTTGCTCACCTGGTCCGCGCAATATTATCAATTTCCGATTGGTGA
AGTATTTCAGAGTGCCCTGCCGACATTTTTACGTCAGGGCAAACCCTATAATTTATTGGCCCGGCTGTGGAAAGTGCTGG
ATTTGCATGCCGAAGACAAGCTGACGCGCTCTGAAAAACAGCAACAGGCGTATAAAGTGCTGAAATTACATCCTCAAGGC
ACCACAGAAAATATTTTAAATTTAGCTGGAATTGAAACGGCGACACTCAAAGCGCTGGAAAAGAAGGCGATTGTGCAATG
TATTCTGGAACATCAGGACTTTAGTCCTCAACCGGTCACACTGGCACAAATGCCCTTAACCGCAAATGAAGATCAGAAAA
AAGCCATTCAACAGGTGTTAAAAGCCCAGAAAAAATATCAGGCTTTTTTACTGGATGGCTTGACCGGGAGCGGTAAAACC
GAAGTGTATTTGCAAATCATGCAAGAGGTGCTGAAACAGGGTAAACAGGTCTTGGTTTTAGTGCCTGAAATTGGCCTGAC
CCCGCAGACCATCAGCCGGTTCCAGTCACGTTTTCATGGCAACATTGTACTGCTGCATTCAGGACTGAACGATTCAAAGC
GCCTGCAAGCCTGGCAGGCTGCACAAACGGGCAAGGCTTCGATTATATTAGGGACCCGTTCAGCCATTTATACACCGCTA
CCCAATCTGGGTCTGATCATTCTGGATGAGGAACACGACCTGTCTTTCAAACAGCAGGAAGGCTTTCGCTACCATGCCCG
TGATGTGGCAATGTACCGTGCCCATCTGGAAAATTGTCCGATTATTTTAGGCTCAGCCACCCCGAGTATTGACAGCTATG
CACTGGTTGAAATGGGGAAAATGACCCGTTTAGAACTGAGTCAACGTGCCGGTGCAGCCGTGATGCCAAAAATTCATCTG
ATTGACCTAAAAATTGCACAAAAACAGAATGGCATGAGCCAAAGCCTGATTAATGAAATTCAAAAACGTCTGGATAAAAA
AGAACAGGTATTGGTGTTTTTAAACCGTCGCGGTTATGCCCCGGTGCTGATTTGTGAAAGCTGTGCCTGGCAAGCCAAAT
GTCCGCATTGTGATGCCAACTTTACCGTGCATCGCCAGCCTTATCAGCATTTGCATTGTCACCACTGTGGCAGCATTCAC
CGTCTACCGGAACAATGCCCGCAGTGCAAGCATAGTGAATTAAAACCGATTGGTCTGGGCACCGCCAAAGTGGAAGAAAA
CCTGCAACAACTGTTCCCCCATTTCGATGTGATCCGGGTCGACCGCGATTCCACCAGCCGGGTCGGCAGCTGGCAAAAAA
TTTATGACAAAATCCAGAAAAGTGAACCGGTGATTTTGCTCGGCACCCAGATGCTGGCCAAAGGACATCATTTTCCCTAT
GTCACTTTAGTGGCTATTTTAGATATTGATTCCGGCCTGCTCAGTGTCGATTTCCGTGCCACCGAACGCACGGCACAACT
GATTGTACAGGTCGCTGGGCGTGCCGGACGCGGTGAACGCAAAGGTGAAGTCTATTTACAAACTCTGAGACCGGATCATC
CACTATTAAATACCTTAATTGACAAAGATTACCGGCATTTCGCCAAACAGACCTTAAAAGAACGTCAGGCCGCCGCTTTG
CCACCTTTTCGTTATGCAGCATTAATACGCTGTGAATCGAAAAATCAGGAACAGAATCAGGAATTTTTACAGCAGCATGC
ACAGGCTTTAAGACAGGTTTCTGCAAACCTGATTGATATCTGGGGACCGATTCCTGCCCCGATGGAACGTAAGGCCGGGC
GTTATCAGGCGCATATGGTGCTGCTGTCACAAGATCGGGCCCGATTACATTTTTATATCCGTGCCTGGTGGCAAAATATG
TTGCATGAAAAGCCCTCAAACATGAAACTGACACTCGATATAGATCCTCAAGAATTAAGCTAA

Domains

Predicted by InterproScan.

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)

Type III restriction enzyme, res subunit (ResIII)

(209-369)

Primosomal protein N C-terminal domain (PriA_C)

(642-736)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

72.642

100

0.728

Multiple sequence alignment