Detailed information    

insolico Bioinformatically predicted

Overview

Name   chpA   Type   Regulator
Locus tag   ABJ384_RS03865 Genome accession   NZ_CP157981
Coordinates   800433..804902 (+) Length   1489 a.a.
NCBI ID   WP_349928959.1    Uniprot ID   A0AAU7SZ56
Organism   Acinetobacter sp. A1-4-2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 795433..809902
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABJ384_RS03840 (ABJ384_03840) - 795898..796542 (-) 645 WP_349928954.1 hypothetical protein -
  ABJ384_RS03845 (ABJ384_03845) pilG 796824..797207 (+) 384 WP_086195987.1 twitching motility response regulator PilG Regulator
  ABJ384_RS03850 (ABJ384_03850) - 797231..797599 (+) 369 WP_086195986.1 response regulator -
  ABJ384_RS03855 (ABJ384_03855) - 797605..798141 (+) 537 WP_086195985.1 chemotaxis protein CheW -
  ABJ384_RS03860 (ABJ384_03860) - 798187..800259 (+) 2073 WP_349928957.1 methyl-accepting chemotaxis protein -
  ABJ384_RS03865 (ABJ384_03865) chpA 800433..804902 (+) 4470 WP_349928959.1 Hpt domain-containing protein Regulator
  ABJ384_RS03870 (ABJ384_03870) - 804907..805365 (+) 459 WP_086195982.1 hypothetical protein -
  ABJ384_RS03875 (ABJ384_03875) dapE 805442..806578 (-) 1137 WP_166167645.1 succinyl-diaminopimelate desuccinylase -
  ABJ384_RS03880 (ABJ384_03880) - 806708..806857 (-) 150 WP_086195980.1 entericidin A/B family lipoprotein -
  ABJ384_RS03885 (ABJ384_03885) - 806957..807853 (-) 897 WP_349928961.1 DUF1853 family protein -
  ABJ384_RS03890 (ABJ384_03890) - 807950..808333 (+) 384 WP_349928963.1 YbaN family protein -
  ABJ384_RS03895 (ABJ384_03895) elsL 808341..808871 (+) 531 WP_349928964.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence

Protein


Download         Length: 1489 a.a.        Molecular weight: 167238.97 Da        Isoelectric Point: 4.2789

>NTDB_id=1009471 ABJ384_RS03865 WP_349928959.1 800433..804902(+) (chpA) [Acinetobacter sp. A1-4-2]
MKEILKNLVETTTLPEDSYLDQDAEILEIFVEEIEEIFVELSTLFTTWLENPNDQETLTTIRRHFHTLKGSGRMVGAKSA
GELAWAVEDTLNRVISGTVPLDSTVQRFAQTVFNIYQYKLYPIFKTVQNADIDLRPLVLLGQQIQQQVSLEPALEELLEL
SSTLTSVNSLTGLELQDQSFSEAAPEMAIETTATATPVAADDNNDIEETVAIFIEEAEEHLFTIDQFLKNEQEQHQDYNG
LIRALHTLRGSSSMAHIDQIFAASTKVENLFKTLLQEEIVSTSSQTALLIQYAEFVRDYLHTLRQGQTQKLDAIYATFNS
AWDDYGFSSAEVDEDVNPQGLVSKLVELNIDLLLDAEFEFEKRAKVEYPEYIQALSQQAQQLLDNTDNRAAMGIYQFTHE
LKSGYEALVLKPELLNIDYAYDLFGQAHQEFIHLFDTLAAGQRVILTEDIQKVLNDLAAFVQQDLEQFEVQEPNPATQVE
ASPTAASGIVDLAQISQKIGSDREHMHADDANRDFDEDLLDIFLEEAEELLGGIDQDLNTWSKDPSDTAALNNLMRYLHT
LKGGANMIQATHIGLIAHELESIYERVIRHQIEVNPQLISIIRLVQDDVSDRIQVIRDEQIDYSGTESIEILRNIQAIAQ
GSVAVSTAVAEVEVQAEPEVAAEIEELETATTVETEIEPEIQLETEVEAKAEAETAAEVALATPDHVEEPDDSIRLIAEE
TFWEEAEEILESTDSLLKQWFEQRSDRSLLLQLQRAAHSLKGGARMVENEPVGAIAYQLETTFERFAVHQFNSNVYDLLL
QTTLAWLKQAIFEHDYSNFDSVKLSLESIEFVDVIAQLPKRVAESDTLSTAKVFEFVQGDGTEPPAMMGEWDTSNQQDNS
NEMIRISADLVEKMIDLSGENAINRSRIEMDLGQFSNTLNEMELAIKRLADQLRRMEGELESQIIAKHGDNSRYADFDPL
EMDQYSSLNQLSKSLAESASDLVDFKTTLSEKIRDTEGLLLQQSRIQAEIQESLMRTRLVPFDRLLPRLQRIVRQTSSTL
NRPAELVVQNTEGELDRNILERLVTPFEHMLRNAIDHGLEDTHVRHELQKPEVGKIILNISRQGTDVLVSFSDDGKGIDE
TKIKEKALSLGLIKADQSIDKQEILQLIFHPGFTTAKEVTQISGRGVGLDVVQSEIKALGGHISIDSELGKGTTFTIRVP
TTVAVSDALMVKSGDQQFAISLAQIDRIVRIAPSALEQYFNSKEDFFKIDNTSYKLRYLSEFVSNQPLPRLSNVAHSLPV
LLIKGNSGQTIALLVDQLIGSRAQIVVKPIGQQFSSVGAVAGATILGDGQVCLILDGQNIARQIQNTQRLKHVSDQREHS
RYSNARRLIMIVDDSVTVRKVTSRLLERQGFDVVTAKDGIDAMEQLENVKPDLMLLDIEMPRMDGFEVTNLVRHHDVHQN
LPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLENVESLLEISQG

Nucleotide


Download         Length: 4470 bp        

>NTDB_id=1009471 ABJ384_RS03865 WP_349928959.1 800433..804902(+) (chpA) [Acinetobacter sp. A1-4-2]
ATGAAAGAAATATTAAAAAATTTAGTTGAAACGACTACGCTTCCTGAAGATAGTTATCTTGATCAAGATGCAGAAATTCT
AGAAATTTTTGTTGAAGAAATAGAAGAAATCTTCGTTGAATTAAGTACTTTATTTACAACTTGGTTGGAAAATCCGAATG
ACCAAGAAACTTTAACGACCATTCGCCGTCATTTTCATACCCTTAAAGGTTCTGGCCGTATGGTTGGAGCAAAATCTGCG
GGTGAGTTGGCATGGGCGGTTGAAGATACTTTAAATCGGGTTATTTCCGGCACAGTACCTTTGGACAGCACAGTTCAACG
ATTTGCCCAAACTGTATTTAATATTTATCAATACAAGTTATACCCAATTTTTAAAACTGTTCAAAATGCTGATATCGACT
TAAGACCTTTAGTATTATTGGGGCAGCAAATTCAGCAGCAGGTCAGTTTGGAACCTGCACTAGAAGAATTGCTTGAACTG
TCTAGCACACTGACCAGTGTCAATAGTCTCACTGGTCTGGAATTGCAGGATCAATCATTTAGTGAAGCAGCGCCTGAAAT
GGCAATCGAAACTACTGCTACAGCAACCCCAGTTGCAGCAGACGACAACAATGATATTGAAGAAACGGTCGCGATCTTTA
TTGAAGAAGCAGAAGAACATCTGTTTACGATTGATCAGTTCCTGAAAAATGAACAGGAACAACATCAGGATTATAATGGC
CTGATCCGTGCCTTGCATACCTTGCGTGGCAGCTCTTCTATGGCGCATATTGATCAGATTTTTGCAGCCAGTACCAAGGT
TGAAAACTTATTTAAAACACTTTTACAAGAAGAAATTGTTTCTACCTCCAGCCAGACTGCGTTGCTAATTCAATATGCTG
AATTTGTCCGTGATTATTTACATACTTTAAGACAGGGTCAGACCCAGAAACTTGATGCCATATATGCCACCTTTAATTCG
GCATGGGACGACTATGGTTTCAGTTCTGCAGAAGTGGATGAGGATGTCAATCCGCAAGGTCTGGTGTCCAAACTGGTCGA
ATTGAATATTGATTTACTTCTGGATGCCGAATTCGAATTTGAAAAACGTGCCAAAGTAGAATATCCGGAATACATTCAGG
CCTTAAGCCAGCAGGCACAGCAATTATTGGATAATACTGATAATCGTGCTGCGATGGGCATCTATCAATTTACCCATGAA
TTGAAGTCTGGCTATGAAGCGCTGGTATTAAAACCGGAACTGCTCAATATCGACTATGCATATGATCTGTTTGGGCAGGC
ACATCAAGAGTTCATTCATCTGTTCGATACCCTGGCGGCAGGTCAGCGCGTTATTTTAACGGAAGATATCCAGAAAGTTC
TGAATGATCTGGCAGCCTTTGTTCAGCAGGATCTTGAACAGTTCGAAGTTCAGGAACCGAATCCTGCAACTCAAGTTGAA
GCCTCACCAACTGCTGCTTCAGGTATTGTAGATCTGGCACAGATTTCACAAAAAATTGGTTCAGACCGTGAACACATGCA
TGCTGATGATGCAAATCGTGATTTTGATGAAGATTTGTTGGATATCTTCCTGGAAGAAGCAGAAGAATTACTGGGCGGGA
TCGATCAAGACTTGAATACCTGGTCGAAAGATCCGTCCGATACTGCGGCACTGAATAATTTAATGCGTTATTTGCATACC
CTTAAAGGGGGTGCCAATATGATTCAGGCGACTCATATTGGCTTAATTGCGCATGAATTGGAAAGCATTTATGAACGCGT
GATCCGTCATCAAATTGAGGTCAATCCGCAACTCATCAGTATTATTCGCTTAGTACAAGATGATGTATCAGACCGTATTC
AAGTCATTCGCGATGAGCAGATTGATTATTCTGGTACTGAATCGATTGAAATTTTGCGTAATATTCAGGCTATCGCTCAA
GGTAGTGTGGCTGTAAGCACCGCAGTTGCGGAAGTCGAAGTTCAGGCTGAACCTGAAGTTGCAGCTGAAATTGAAGAACT
TGAAACTGCAACGACAGTAGAAACAGAAATTGAACCTGAGATTCAGCTTGAAACTGAAGTGGAAGCTAAAGCCGAAGCTG
AAACAGCTGCTGAAGTTGCCTTGGCAACTCCAGACCATGTTGAAGAGCCAGATGACAGTATCCGTTTAATTGCAGAAGAA
ACCTTCTGGGAAGAAGCAGAAGAAATTCTGGAGTCTACAGATAGCCTGTTGAAACAGTGGTTTGAGCAGCGTAGTGACCG
TAGCTTGCTGCTTCAATTACAGCGTGCAGCCCACAGTTTGAAAGGTGGCGCACGTATGGTGGAAAATGAACCGGTAGGGG
CAATTGCTTACCAGCTGGAAACCACCTTCGAACGCTTTGCGGTGCATCAGTTCAACTCCAATGTTTATGACCTGTTATTG
CAAACGACTTTGGCATGGTTAAAGCAGGCCATTTTCGAGCATGATTACAGTAATTTTGACAGCGTCAAATTAAGTTTAGA
GTCGATTGAATTTGTTGATGTCATTGCGCAGTTACCTAAGCGCGTGGCCGAATCTGATACGCTGTCTACGGCTAAAGTCT
TTGAATTTGTTCAGGGTGATGGTACCGAACCTCCAGCAATGATGGGTGAGTGGGATACAAGTAATCAACAGGACAACAGC
AATGAAATGATCCGTATTTCTGCCGATCTGGTCGAGAAAATGATCGACTTGTCTGGTGAAAATGCGATTAACCGTTCACG
TATTGAAATGGACTTGGGACAGTTTAGTAATACCCTGAACGAAATGGAACTGGCGATCAAGCGTCTGGCTGACCAGTTAC
GTCGAATGGAAGGTGAGCTCGAGTCTCAAATTATTGCCAAACATGGTGATAATTCACGTTATGCCGATTTTGATCCTCTA
GAGATGGACCAATATTCATCATTAAACCAGTTGTCAAAATCGCTGGCGGAATCTGCATCTGACTTGGTCGATTTCAAGAC
GACCCTGTCAGAAAAAATTCGTGATACGGAAGGTTTACTGTTACAACAATCCCGTATTCAAGCTGAGATTCAAGAAAGCC
TGATGCGTACCCGTCTGGTACCATTTGATCGTTTATTACCACGTTTACAACGGATTGTGCGTCAAACCTCATCGACTCTG
AACCGTCCGGCCGAGCTGGTGGTGCAAAACACCGAAGGTGAATTGGACCGTAACATTCTAGAGCGTCTGGTTACACCGTT
CGAGCACATGCTGCGTAATGCGATTGACCATGGTCTGGAAGATACTCACGTACGACATGAGCTACAGAAGCCTGAAGTCG
GGAAAATTATTCTCAATATTAGCCGTCAAGGTACAGATGTACTGGTGTCATTCAGTGATGACGGTAAAGGGATTGATGAA
ACAAAAATTAAAGAAAAAGCACTCAGCTTGGGTTTAATTAAAGCCGATCAATCCATTGATAAGCAGGAAATCCTGCAATT
AATTTTCCATCCTGGATTTACTACTGCCAAAGAAGTGACGCAAATTTCCGGACGCGGTGTAGGTCTGGACGTGGTGCAAA
GCGAAATTAAGGCACTGGGTGGGCATATTTCCATCGATTCTGAATTGGGTAAAGGGACCACCTTTACCATTCGCGTACCG
ACTACGGTGGCTGTAAGTGACGCCTTGATGGTCAAATCAGGCGACCAGCAGTTTGCGATTTCACTGGCACAAATTGACCG
TATTGTACGTATTGCACCATCAGCGCTTGAACAGTATTTCAATAGTAAAGAAGATTTCTTTAAAATTGATAACACCAGTT
ACAAACTGCGTTATTTATCCGAATTTGTGTCCAATCAGCCTTTACCACGTTTAAGTAATGTTGCACATTCTTTACCTGTA
TTGCTGATTAAAGGCAATAGTGGTCAAACTATTGCACTACTTGTGGATCAGCTGATTGGTTCGCGTGCACAAATTGTGGT
GAAACCGATCGGTCAGCAATTCTCAAGTGTTGGCGCTGTTGCCGGAGCGACTATTCTAGGTGATGGTCAAGTCTGTCTGA
TTCTGGATGGTCAGAATATTGCCCGACAAATTCAGAACACTCAACGTCTTAAACATGTGTCTGATCAACGTGAGCATTCG
CGTTACAGTAATGCACGCCGCCTGATCATGATTGTGGATGACTCGGTGACAGTACGTAAGGTGACTTCACGTTTACTTGA
ACGTCAAGGCTTTGATGTGGTGACGGCCAAAGATGGTATTGATGCCATGGAGCAGCTGGAAAATGTCAAACCAGACTTGA
TGTTGCTGGATATTGAAATGCCGCGTATGGACGGTTTTGAAGTCACGAATCTGGTTCGTCACCATGACGTGCATCAAAAC
TTGCCTATTATTATGATTACGTCGAGAACAGGCGAGAAGCACCGTGAACGTGCATTCAGTCTTGGGGTAACGCACTATAT
GGGCAAACCGTTCCAGGAAGCGGAATTGCTGGAAAATGTGGAAAGTTTGTTAGAAATCAGTCAGGGATAA

Domains

Predicted by InterproScan.

Hpt domain (Hpt)

(518-604)

Hpt domain (Hpt)

(25-95)

Hpt domain (Hpt)

(209-280)

Hpt domain (Hpt)

(720-784)

CheW-like domain (CheW)

(1208-1343)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(1066-1201)

Response regulator receiver domain (Response_reg)

(1369-1480)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

61.924

100

0.631

Multiple sequence alignment