Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | ABJ384_RS01465 | Genome accession | NZ_CP157981 |
| Coordinates | 311326..311979 (+) | Length | 217 a.a. |
| NCBI ID | WP_349928477.1 | Uniprot ID | - |
| Organism | Acinetobacter sp. A1-4-2 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 306326..316979
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABJ384_RS01450 (ABJ384_01450) | - | 306714..307517 (+) | 804 | WP_349928471.1 | putative RNA methyltransferase | - |
| ABJ384_RS01455 (ABJ384_01455) | ponA | 307571..310099 (-) | 2529 | WP_349928473.1 | penicillin-binding protein PBP1a | - |
| ABJ384_RS01460 (ABJ384_01460) | pilM | 310265..311326 (+) | 1062 | WP_349928475.1 | pilus assembly protein PilM | Machinery gene |
| ABJ384_RS01465 (ABJ384_01465) | pilN | 311326..311979 (+) | 654 | WP_349928477.1 | PilN domain-containing protein | Machinery gene |
| ABJ384_RS01470 (ABJ384_01470) | pilO | 311976..312710 (+) | 735 | WP_349928479.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| ABJ384_RS01475 (ABJ384_01475) | pilP | 312713..313240 (+) | 528 | WP_180043050.1 | pilus assembly protein PilP | Machinery gene |
| ABJ384_RS01480 (ABJ384_01480) | pilQ | 313258..315429 (+) | 2172 | WP_349928481.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| ABJ384_RS01485 (ABJ384_01485) | aroK | 315466..316014 (+) | 549 | WP_349928483.1 | shikimate kinase AroK | - |
Sequence
Protein
Download Length: 217 a.a. Molecular weight: 24286.55 Da Isoelectric Point: 4.9843
>NTDB_id=1009458 ABJ384_RS01465 WP_349928477.1 311326..311979(+) (pilN) [Acinetobacter sp. A1-4-2]
MARINLLPWRDELREKRKKEFIAICIGAAFIGALAVTSSWFYYDHKLEDQEQANQLITSTNQNLDVQLKSLEGLEAQRNA
IIERMKLIQGLQGQRPIAVRLIDELVRVAPANLYITKFVRTGDKFTIEGRAESPNTVAEFLRNLEASAWYRNAFMNSFLA
VEEQKDKAPSSVIPRIEEGYGSFVVTADLDEIAQPAAPEAQQQAASNTANSTVEAAK
MARINLLPWRDELREKRKKEFIAICIGAAFIGALAVTSSWFYYDHKLEDQEQANQLITSTNQNLDVQLKSLEGLEAQRNA
IIERMKLIQGLQGQRPIAVRLIDELVRVAPANLYITKFVRTGDKFTIEGRAESPNTVAEFLRNLEASAWYRNAFMNSFLA
VEEQKDKAPSSVIPRIEEGYGSFVVTADLDEIAQPAAPEAQQQAASNTANSTVEAAK
Nucleotide
Download Length: 654 bp
>NTDB_id=1009458 ABJ384_RS01465 WP_349928477.1 311326..311979(+) (pilN) [Acinetobacter sp. A1-4-2]
ATGGCAAGAATTAACTTGCTCCCTTGGCGTGATGAGCTGAGAGAGAAACGAAAAAAAGAATTTATAGCAATTTGTATTGG
GGCGGCATTCATTGGCGCTTTGGCGGTTACATCCTCATGGTTTTACTATGACCATAAACTTGAAGACCAGGAACAGGCCA
ATCAGCTGATTACCAGCACCAATCAAAATCTTGATGTGCAATTAAAATCTCTGGAAGGTTTGGAAGCGCAGCGCAATGCT
ATTATTGAGCGTATGAAACTGATTCAAGGCTTGCAAGGGCAACGTCCGATTGCAGTACGTCTGATAGATGAACTGGTTCG
TGTTGCGCCAGCTAATTTGTACATTACCAAATTTGTGCGTACAGGCGATAAATTCACCATTGAAGGCAGAGCTGAAAGTC
CAAATACCGTGGCAGAATTTTTGCGTAATTTAGAAGCATCTGCCTGGTATCGCAACGCTTTCATGAATTCTTTTTTAGCG
GTTGAAGAGCAAAAAGATAAAGCACCAAGTTCCGTGATTCCACGTATTGAAGAGGGTTATGGTTCATTTGTGGTGACTGC
CGACCTGGATGAAATCGCTCAGCCTGCTGCACCGGAAGCACAACAACAAGCAGCATCCAATACAGCTAATTCAACCGTGG
AGGCAGCCAAATGA
ATGGCAAGAATTAACTTGCTCCCTTGGCGTGATGAGCTGAGAGAGAAACGAAAAAAAGAATTTATAGCAATTTGTATTGG
GGCGGCATTCATTGGCGCTTTGGCGGTTACATCCTCATGGTTTTACTATGACCATAAACTTGAAGACCAGGAACAGGCCA
ATCAGCTGATTACCAGCACCAATCAAAATCTTGATGTGCAATTAAAATCTCTGGAAGGTTTGGAAGCGCAGCGCAATGCT
ATTATTGAGCGTATGAAACTGATTCAAGGCTTGCAAGGGCAACGTCCGATTGCAGTACGTCTGATAGATGAACTGGTTCG
TGTTGCGCCAGCTAATTTGTACATTACCAAATTTGTGCGTACAGGCGATAAATTCACCATTGAAGGCAGAGCTGAAAGTC
CAAATACCGTGGCAGAATTTTTGCGTAATTTAGAAGCATCTGCCTGGTATCGCAACGCTTTCATGAATTCTTTTTTAGCG
GTTGAAGAGCAAAAAGATAAAGCACCAAGTTCCGTGATTCCACGTATTGAAGAGGGTTATGGTTCATTTGTGGTGACTGC
CGACCTGGATGAAATCGCTCAGCCTGCTGCACCGGAAGCACAACAACAAGCAGCATCCAATACAGCTAATTCAACCGTGG
AGGCAGCCAAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Acinetobacter baumannii D1279779 |
67.742 |
100 |
0.677 |
| comN | Acinetobacter baylyi ADP1 |
71.078 |
94.009 |
0.668 |