Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   H0504_RS03775 Genome accession   NZ_LR822011
Coordinates   739922..740404 (+) Length   160 a.a.
NCBI ID   WP_011226072.1    Uniprot ID   Q5M461
Organism   Streptococcus thermophilus isolate STH_CIRM_23     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 734922..745404
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H0504_RS03755 (STHERMO_0815) queG 735795..736913 (+) 1119 WP_011226076.1 tRNA epoxyqueuosine(34) reductase QueG -
  H0504_RS03760 (STHERMO_0816) prfB 736966..738064 (+) 1099 WP_096811488.1 peptide chain release factor 2 -
  H0504_RS03765 (STHERMO_0817) ftsE 738152..738844 (+) 693 WP_002953094.1 cell division ATP-binding protein FtsE -
  H0504_RS03770 (STHERMO_0818) ftsX 738837..739766 (+) 930 WP_041828245.1 permease-like cell division protein FtsX -
  H0504_RS03775 (STHERMO_0819) mutX 739922..740404 (+) 483 WP_011226072.1 NUDIX hydrolase Machinery gene
  H0504_RS03780 (STHERMO_0820) - 740415..741593 (+) 1179 WP_011226071.1 AI-2E family transporter -
  H0504_RS03785 (STHERMO_0821) - 741583..742812 (+) 1230 WP_011681192.1 tetratricopeptide repeat protein -
  H0504_RS03790 (STHERMO_0822) lepB 742935..743492 (+) 558 WP_011226069.1 signal peptidase I -
  H0504_RS03795 (STHERMO_0823) pepT 743701..744924 (+) 1224 WP_011226068.1 peptidase T -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18869.36 Da        Isoelectric Point: 4.7200

>NTDB_id=1009239 H0504_RS03775 WP_011226072.1 739922..740404(+) (mutX) [Streptococcus thermophilus isolate STH_CIRM_23]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREIFEETHLTVKKMDFKGMITFPEFTPGH
DWYTYVFKVTDFEGKLISDEESREGTLEWVPYDQVLTKQTWEGDYEIFKWILEDKPFFSAKFSYDCNQNLIDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=1009239 H0504_RS03775 WP_011226072.1 739922..740404(+) (mutX) [Streptococcus thermophilus isolate STH_CIRM_23]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGGAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTCGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTTTCGAGGAAACTCATTTGACAGTGAAAAAGATGGACTTCAAAGGTATGATTACCTTCCCAGAATTTACTCCGGGCCAC
GATTGGTATACCTATGTCTTTAAGGTGACTGATTTTGAAGGAAAACTCATTTCTGATGAGGAATCTCGTGAAGGGACACT
TGAATGGGTACCATATGATCAGGTTTTAACTAAACAAACCTGGGAAGGTGACTATGAGATTTTTAAGTGGATTCTAGAAG
ATAAACCTTTCTTCTCTGCAAAATTTAGCTACGATTGTAACCAAAACTTGATAGATAAAACTGTAACATTTTATGATAAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5M461

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706