Detailed information    

insolico Bioinformatically predicted

Overview


Name   treR   Type   Regulator
Locus tag   ABKA15_RS07075 Genome accession   NZ_CP157941
Coordinates   1443373..1444083 (+) Length   236 a.a.
NCBI ID   WP_049512453.1    Uniprot ID   A0A7L8W6T3
Organism   Streptococcus sp. KHUD_010     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1438373..1449083
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABKA15_RS07065 (ABKA15_07060) treC 1439345..1440976 (-) 1632 WP_049512457.1 alpha,alpha-phosphotrehalase -
  ABKA15_RS07070 (ABKA15_07065) treP 1441184..1443193 (-) 2010 WP_049512455.1 PTS system trehalose-specific EIIBC component -
  ABKA15_RS07075 (ABKA15_07070) treR 1443373..1444083 (+) 711 WP_049512453.1 trehalose operon repressor Regulator
  ABKA15_RS07080 (ABKA15_07075) - 1444235..1445575 (-) 1341 WP_049512450.1 hemolysin family protein -
  ABKA15_RS07085 (ABKA15_07080) - 1445664..1447313 (-) 1650 WP_049512448.1 phosphoenolpyruvate carboxykinase (ATP) -
  ABKA15_RS07090 (ABKA15_07085) - 1447565..1448689 (-) 1125 WP_003028351.1 AI-2E family transporter -

Sequence


Protein


Download         Length: 236 a.a.        Molecular weight: 27525.61 Da        Isoelectric Point: 9.4591

>NTDB_id=1009127 ABKA15_RS07075 WP_049512453.1 1443373..1444083(+) (treR) [Streptococcus sp. KHUD_010]
MKKYEQIFKLLEQDILNEKYQMNDYLPSEHELVQTYKVSRDTIRKSLDLLQKAGLIQKMRGQGSKVIQQEQIDFPVSNLT
SYQELVRQHGMNSKTNVIQLEKITVDKKLSSLTGFPEYRLVWRIIRQRVVDGIASVLDIDYLDKSFVPSISREIAEHSIY
AYLEGELGLHIAYAQKEITIDPATNRDKILMSIGNDHHVVSVKSKVYLADGQQFQFTDSRHKLEKFRFVDFAKRQK

Nucleotide


Download         Length: 711 bp        

>NTDB_id=1009127 ABKA15_RS07075 WP_049512453.1 1443373..1444083(+) (treR) [Streptococcus sp. KHUD_010]
ATGAAAAAATATGAACAAATTTTTAAACTCTTAGAACAAGATATTCTAAACGAGAAATATCAGATGAATGATTATCTTCC
TAGCGAACACGAACTTGTCCAGACCTACAAGGTCAGCCGTGACACGATTCGTAAATCGCTTGATTTGCTTCAAAAAGCTG
GTCTCATTCAAAAAATGAGAGGTCAAGGCTCCAAAGTCATCCAACAAGAACAGATTGACTTTCCCGTTTCCAACCTAACT
AGTTACCAAGAACTTGTCCGGCAACATGGAATGAATTCTAAAACCAATGTCATCCAGTTAGAAAAAATTACAGTTGATAA
AAAATTATCCAGTCTTACTGGTTTTCCTGAATACCGTCTGGTGTGGCGGATTATTCGCCAAAGGGTCGTCGACGGGATTG
CCTCCGTCTTAGATATTGATTACCTTGATAAGAGTTTTGTCCCTTCTATTAGCCGTGAAATTGCAGAGCATTCAATTTAT
GCTTATTTAGAAGGTGAACTGGGGCTACACATTGCTTACGCCCAAAAAGAAATCACAATTGATCCAGCTACCAATCGCGA
TAAAATATTGATGAGCATTGGAAATGACCACCATGTCGTCTCTGTCAAATCAAAAGTCTATCTCGCAGACGGACAGCAAT
TTCAGTTTACAGATAGTCGTCATAAACTCGAAAAATTCCGTTTCGTTGACTTTGCCAAGCGGCAAAAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7L8W6T3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

65.678

100

0.657


Multiple sequence alignment