Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   ABKA15_RS06345 Genome accession   NZ_CP157941
Coordinates   1293106..1294908 (-) Length   600 a.a.
NCBI ID   WP_049513727.1    Uniprot ID   A0A7L8W809
Organism   Streptococcus sp. KHUD_010     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 1288106..1299908
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABKA15_RS06330 (ABKA15_06325) - 1290669..1291238 (-) 570 WP_080984162.1 LURP-one-related family protein -
  ABKA15_RS06335 (ABKA15_06330) prsA 1291376..1292314 (-) 939 WP_049513723.1 peptidylprolyl isomerase PrsA -
  ABKA15_RS06340 (ABKA15_06335) - 1292421..1293104 (-) 684 WP_049513725.1 O-methyltransferase -
  ABKA15_RS06345 (ABKA15_06340) pepF 1293106..1294908 (-) 1803 WP_049513727.1 oligoendopeptidase F Regulator
  ABKA15_RS06350 (ABKA15_06345) coiA 1294860..1295891 (-) 1032 WP_049513729.1 competence protein CoiA family protein Machinery gene
  ABKA15_RS06355 (ABKA15_06350) celB 1296213..1297556 (-) 1344 WP_049513730.1 PTS cellobiose transporter subunit IIC -
  ABKA15_RS06360 (ABKA15_06355) - 1297596..1298102 (-) 507 WP_049513731.1 hypothetical protein -
  ABKA15_RS06365 (ABKA15_06360) - 1298126..1298443 (-) 318 WP_049513733.1 PTS cellobiose transporter subunit IIA -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 69232.16 Da        Isoelectric Point: 4.5482

>NTDB_id=1009123 ABKA15_RS06345 WP_049513727.1 1293106..1294908(-) (pepF) [Streptococcus sp. KHUD_010]
MAKQRNEIEEKYTWDLTTIFPTDEAFEAELSQVSKELKEASSLAGHLLDSADSLLKTTEIQLDLMRRIEKLYSYAHMKND
QDTRVAKYQEYQAKGMAIYSEFGQTFAFYEPEFMAITDEQYQTFLAEKPELKIYQHFFDKLLQKKTHILSQREEELLAGA
GEIFSAAGDTFGILDNADIVFPTVHDEEGNEVQLTHGNYISLVESKNRTVRKEAYEALYSVYEQYQHTYAKTLQTNVKVH
NYNAKVRDFSSAREAALSANFIPESVYDSLVSAVNKHLPLLHRYIALRAKILGLSDLKMYDLYTPLSEADYKFTYEEALT
KAEEVLAILGEDYLGRVKEAFSDRWIDVYENQGKRSGAYSGGSYDTNAFMLLNWQDTLDNLFTLVHETGHSMHSSYTREN
QPYVYGDYSIFLAEIASTTNENILTEKLLEEVDDDHTRFAILNHFLDGFRGTVFRQTQFAEFEHAIHKADQEGQVLTSEF
LNDLYADLNEKYYGLTKEDNPQIQYEWARIPHFYYDYYVFQYSTGFSAASALADKIVNGTQEDKEKYLNYLKAGNSDYPL
NVIKKAGVDMEKEDYLNAAFAVFERRLDEFEALVEKLGLA

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=1009123 ABKA15_RS06345 WP_049513727.1 1293106..1294908(-) (pepF) [Streptococcus sp. KHUD_010]
ATGGCAAAACAAAGAAATGAAATTGAAGAAAAATACACTTGGGACCTAACAACGATTTTCCCAACAGATGAAGCTTTTGA
GGCAGAGTTAAGTCAAGTTTCAAAAGAATTAAAAGAAGCCAGCAGCTTAGCAGGTCATCTTTTGGATTCGGCTGATAGCC
TTTTAAAAACAACAGAAATCCAATTGGACTTAATGCGTCGCATAGAAAAGCTCTATTCCTATGCTCACATGAAAAATGAC
CAAGATACGCGCGTGGCAAAATATCAAGAATACCAAGCCAAAGGAATGGCCATTTATAGCGAGTTCGGACAAACTTTTGC
TTTCTATGAACCAGAATTTATGGCAATCACAGACGAGCAATATCAGACTTTCTTAGCTGAAAAGCCCGAATTGAAAATCT
ATCAACACTTCTTTGATAAGCTGCTGCAAAAGAAAACTCACATTCTTTCTCAACGTGAGGAAGAATTGTTAGCAGGAGCT
GGTGAAATTTTTAGTGCTGCGGGTGATACTTTTGGAATCTTAGACAATGCTGATATTGTCTTTCCAACCGTGCACGACGA
AGAAGGAAATGAAGTGCAATTGACGCACGGAAATTACATTAGTTTAGTGGAGTCGAAAAATCGTACAGTCCGCAAGGAAG
CTTATGAAGCGCTTTACAGCGTCTATGAGCAATACCAACACACTTATGCTAAGACACTCCAAACGAATGTTAAAGTTCAT
AATTACAATGCCAAAGTTCGTGATTTTTCTTCTGCGCGTGAAGCTGCCTTGTCTGCTAACTTTATTCCAGAAAGTGTTTA
TGATAGCTTAGTGTCTGCGGTCAACAAACATTTGCCACTCTTACATCGCTATATTGCGCTACGTGCAAAGATTTTAGGTC
TTTCTGATTTGAAAATGTACGACCTCTACACACCATTATCAGAAGCAGATTATAAATTTACTTATGAGGAAGCCTTGACG
AAAGCAGAAGAAGTCTTAGCTATCCTTGGAGAAGATTATCTAGGTCGAGTAAAAGAAGCCTTTTCAGATCGTTGGATTGA
TGTTTATGAAAACCAAGGCAAGCGCTCTGGGGCTTATTCTGGTGGTTCTTACGATACCAATGCTTTTATGTTACTCAACT
GGCAAGATACGTTGGACAATCTTTTCACGTTGGTTCATGAAACAGGTCACAGCATGCATTCCAGCTATACTCGTGAAAAT
CAGCCGTACGTTTACGGAGATTATTCTATTTTCTTAGCTGAGATTGCTTCTACGACCAATGAAAATATCCTTACGGAGAA
ATTATTGGAAGAAGTAGATGATGACCATACTCGTTTTGCGATTCTGAATCATTTTTTGGACGGTTTCCGTGGAACTGTTT
TCCGCCAAACTCAATTTGCCGAGTTTGAACATGCCATTCACAAAGCTGACCAAGAAGGTCAAGTCTTGACGAGTGAATTT
TTGAATGATTTGTACGCAGATTTGAATGAAAAATATTATGGTTTAACGAAAGAGGACAACCCACAAATTCAATACGAATG
GGCACGGATTCCACATTTCTACTATGATTACTATGTTTTCCAATACTCAACCGGTTTCTCAGCTGCTTCTGCCTTAGCTG
ATAAGATTGTTAACGGAACGCAAGAAGATAAAGAGAAGTATCTCAACTACTTGAAAGCAGGAAATTCTGATTATCCGCTA
AATGTCATTAAAAAAGCTGGTGTAGATATGGAAAAAGAAGACTATCTCAATGCTGCCTTTGCAGTCTTTGAGCGTCGTCT
TGATGAATTTGAAGCACTCGTAGAAAAGTTAGGATTGGCATAA

Domains

Predicted by InterproScan.

Oligopeptidase F (Peptidase_M3_N)

(112-181)

Peptidase family M3 (Peptidase_M3)

(202-581)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7L8W809

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

68.96

99.333

0.685

Multiple sequence alignment