Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   ABKA15_RS02070 Genome accession   NZ_CP157941
Coordinates   422794..424560 (+) Length   588 a.a.
NCBI ID   WP_049514148.1    Uniprot ID   A0A7L8W5W1
Organism   Streptococcus sp. KHUD_010     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 417794..429560
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABKA15_RS02050 (ABKA15_02045) - 418478..420376 (+) 1899 WP_264341001.1 sucrose-specific PTS transporter subunit IIBC -
  ABKA15_RS02055 (ABKA15_02050) scrK 420810..421709 (+) 900 WP_186832676.1 fructokinase ScrK -
  ABKA15_RS02060 (ABKA15_02055) - 421777..422187 (+) 411 WP_003026163.1 peptide deformylase -
  ABKA15_RS02065 (ABKA15_02060) - 422343..422801 (+) 459 WP_003039423.1 MarR family winged helix-turn-helix transcriptional regulator -
  ABKA15_RS02070 (ABKA15_02065) rcrP 422794..424560 (+) 1767 WP_049514148.1 ABC transporter ATP-binding protein Regulator
  ABKA15_RS02075 (ABKA15_02070) rcrQ 424550..426310 (+) 1761 WP_106388169.1 ABC transporter ATP-binding protein Regulator
  ABKA15_RS02080 (ABKA15_02075) - 426522..426836 (+) 315 WP_022525145.1 PTS cellobiose transporter subunit IIB -
  ABKA15_RS02085 (ABKA15_02080) - 426847..427167 (+) 321 WP_021002019.1 PTS cellobiose transporter subunit IIA -
  ABKA15_RS02090 (ABKA15_02085) - 427294..428691 (-) 1398 WP_049514144.1 glycoside hydrolase family 1 protein -

Sequence

Protein


Download         Length: 588 a.a.        Molecular weight: 65373.05 Da        Isoelectric Point: 5.4678

>NTDB_id=1009102 ABKA15_RS02070 WP_049514148.1 422794..424560(+) (rcrP) [Streptococcus sp. KHUD_010]
MVKLFKRLTVKEVGMIVISILFTCLTVYLELEVPTYISKITELLQMRGTVVSDLWNPGLKMIGLSFASFLSAVTVGFIAA
RLAASFTTSLRSDIFNRVLDYSDAEIKRFSIPSLLTRTTNDLTQIQLMITMGLQVVTRGPIMAIWAITKIIGKSEYWLWA
VIVAVIVNIIMTTVLMTLAFPKQSVIQRLTDKLNSITRESLTGIRVVRAYNAEDYQDDKFAGANDEVTRLNLFVSRLMAI
LNPIMMGISSGLTLAIYWIGAYLIQDAALPERLPIFSDMVVFMSYAMQVVIGFMLMGALFIILPRTLVSAGRINEVLDLY
STIESPTEPKIAKDVKGEVVFDNVSFRYAKNSEAVIEHVSFTAKAGETVAFIGSTGSGKSTLISLIPRFYDVTEGRILVD
GVNVKDYQLEDLHNKVGYIPQKAVLFSGDIKSNLDFGQSNESPLDDEKMWSALDLAQAKSFVEEKEDGLQSEVAQSGTNF
SGGQKQRLAIARALARKPEILIFDDSFSALDYKTDRILREELAKKVKDTTRLIVAQRISTIMDADQILVLDKGKVVGQGT
HKELLATNDVYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1767 bp        

>NTDB_id=1009102 ABKA15_RS02070 WP_049514148.1 422794..424560(+) (rcrP) [Streptococcus sp. KHUD_010]
ATGGTTAAATTGTTTAAACGTTTAACTGTCAAAGAAGTAGGGATGATTGTCATCAGTATCTTGTTTACTTGTTTAACAGT
TTATTTGGAATTAGAGGTTCCAACTTATATTTCAAAAATTACGGAACTCCTACAGATGAGGGGGACAGTAGTTTCTGATT
TGTGGAATCCAGGTTTGAAAATGATTGGGCTGTCTTTTGCGAGCTTTCTTAGTGCTGTGACAGTTGGCTTTATTGCGGCT
AGATTGGCGGCTAGCTTTACAACGAGTTTGCGGTCAGATATTTTCAATCGTGTGCTGGATTATTCAGACGCTGAGATTAA
GCGATTCTCTATTCCGAGTCTTTTGACCCGGACAACCAATGATCTTACGCAAATTCAACTTATGATTACAATGGGCTTGC
AAGTTGTGACGCGTGGGCCAATCATGGCGATTTGGGCGATTACGAAAATCATTGGGAAATCAGAATACTGGCTCTGGGCG
GTTATTGTGGCGGTTATTGTGAATATTATCATGACAACAGTTCTGATGACGCTGGCCTTTCCAAAGCAATCCGTTATTCA
ACGGTTGACTGATAAGTTAAATAGTATTACGCGTGAAAGTCTAACAGGGATTCGTGTTGTTCGGGCTTATAACGCTGAAG
ACTATCAAGATGACAAGTTTGCAGGAGCTAATGATGAAGTGACTCGTTTGAATCTCTTTGTCAGTCGTCTCATGGCGATT
TTAAATCCAATTATGATGGGGATTTCGAGCGGCTTGACTTTGGCGATTTATTGGATTGGGGCTTACTTGATTCAAGACGC
AGCCTTACCAGAGCGCTTGCCTATCTTTAGTGATATGGTCGTCTTTATGTCTTATGCCATGCAAGTGGTGATAGGCTTCA
TGCTTATGGGGGCTCTTTTTATCATTCTACCTCGTACCTTGGTGTCTGCTGGACGGATCAATGAAGTGCTTGATTTATAT
TCAACGATTGAGTCTCCAACAGAGCCAAAAATAGCGAAAGATGTCAAAGGGGAAGTGGTATTTGACAATGTGTCTTTCCG
CTATGCTAAAAACTCTGAGGCTGTCATTGAGCATGTCAGCTTTACAGCAAAAGCAGGTGAAACCGTAGCTTTCATTGGTT
CAACCGGTTCTGGGAAATCTACTCTAATTAGCTTAATTCCTCGTTTTTATGATGTGACAGAAGGAAGAATTTTAGTAGAC
GGCGTAAACGTCAAAGATTATCAGCTAGAAGATTTGCATAATAAAGTTGGCTACATTCCACAAAAAGCTGTCCTCTTCTC
TGGTGATATAAAGAGTAATTTGGACTTTGGACAAAGCAATGAAAGTCCATTGGATGATGAAAAAATGTGGTCTGCATTGG
ACTTGGCACAAGCGAAATCATTTGTTGAAGAAAAAGAAGACGGTTTGCAATCTGAAGTTGCACAAAGCGGTACGAATTTC
TCTGGTGGGCAAAAGCAACGTTTGGCAATTGCGCGTGCGCTTGCTCGCAAGCCTGAAATTTTGATTTTTGATGATTCATT
TTCAGCGCTAGACTATAAGACAGACCGCATTTTGCGGGAAGAATTAGCGAAAAAAGTGAAGGACACAACCAGATTGATTG
TGGCGCAGCGGATATCAACGATTATGGATGCTGATCAGATTTTGGTACTGGATAAAGGAAAAGTAGTCGGTCAGGGTACT
CATAAAGAATTGCTAGCAACAAACGATGTTTACCAAGAAATTGCTTACTCACAATTATCAAAGGAGGAATTGGAAAATGG
AAAATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(17-289)

ABC transporter (ABC_tran)

(357-506)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7L8W5W1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

70.5

100

0.719

Multiple sequence alignment