Detailed information
Bioinformatically predicted
Overview
| Name | ctsF | Type | Machinery gene |
| Locus tag | ABHM94_RS07615 | Genome accession | NZ_CP157939 |
| Coordinates | 1435142..1436323 (-) | Length | 393 a.a. |
| NCBI ID | WP_002894094.1 | Uniprot ID | A0A1J6L696 |
| Organism | Campylobacter jejuni strain P8 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1430142..1441323
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABHM94_RS07585 (ABHM94_07585) | - | 1430687..1431028 (+) | 342 | WP_002784057.1 | hypothetical protein | - |
| ABHM94_RS07590 (ABHM94_07590) | flgM | 1431091..1431288 (+) | 198 | WP_002855791.1 | flagellar biosynthesis anti-sigma factor FlgM | - |
| ABHM94_RS07595 (ABHM94_07595) | - | 1431330..1431764 (+) | 435 | WP_002779263.1 | flagellar protein FlgN | - |
| ABHM94_RS07600 (ABHM94_07600) | flgK | 1431774..1433600 (+) | 1827 | WP_002894098.1 | flagellar hook-associated protein FlgK | - |
| ABHM94_RS07605 (ABHM94_07605) | - | 1433617..1434381 (+) | 765 | WP_002894096.1 | TIGR02757 family protein | - |
| ABHM94_RS07610 (ABHM94_07610) | - | 1434385..1435149 (+) | 765 | WP_002855821.1 | TSUP family transporter | - |
| ABHM94_RS07615 (ABHM94_07615) | ctsF | 1435142..1436323 (-) | 1182 | WP_002894094.1 | type II secretion system F family protein | Machinery gene |
| ABHM94_RS07620 (ABHM94_07620) | ctsE | 1436320..1437879 (-) | 1560 | WP_021137528.1 | GspE/PulE family protein | Machinery gene |
| ABHM94_RS07625 (ABHM94_07625) | ctsX | 1437869..1438456 (-) | 588 | WP_002851370.1 | membrane protein | Machinery gene |
| ABHM94_RS07630 (ABHM94_07630) | ctsP | 1438460..1439068 (-) | 609 | WP_002851464.1 | ATP-binding protein | Machinery gene |
| ABHM94_RS07635 (ABHM94_07635) | ctsD | 1439061..1440473 (-) | 1413 | WP_002856543.1 | pilus (MSHA type) biogenesis protein MshL | Machinery gene |
| ABHM94_RS07640 (ABHM94_07640) | ctsR | 1440451..1440762 (-) | 312 | WP_002855438.1 | hypothetical protein | Machinery gene |
Sequence
Protein
Download Length: 393 a.a. Molecular weight: 45736.38 Da Isoelectric Point: 9.2540
>NTDB_id=1009053 ABHM94_RS07615 WP_002894094.1 1435142..1436323(-) (ctsF) [Campylobacter jejuni strain P8]
MKFYEVEFLKNNQNYTKTIKAENLNIAQTKALSKNWKIIDIKEIQKSNFQRLKDENFILFFKELALLCEVGLSVQEAIKE
LYLMHSCKIMKKILDNLILAQNLNQAFENANFGLNRAELALIKTAEKTGKISEVFSQISKLREKSLESQKQLKKAFRYPT
LVFLSIIGAFLFLMLFVVPNFKDLFENLGASLPFITHVMLEIYNFLDSYGIFCIFLFVVFIVMLILAYKNFHSFAFSCDF
LFLKIPLISRLIIYNQNYYFFMVFSLLLKNGISISKAFDLAIIGLENKFLIFQYKKLFSFIDSGLELSQAFKKIDIFDSL
VFSMLSVAMKSGRLEVLSEEIAKYYQQKSENLMDRFLVFLEPMMTLFVAFLVLFLALGIFLPMWELSSGVNFN
MKFYEVEFLKNNQNYTKTIKAENLNIAQTKALSKNWKIIDIKEIQKSNFQRLKDENFILFFKELALLCEVGLSVQEAIKE
LYLMHSCKIMKKILDNLILAQNLNQAFENANFGLNRAELALIKTAEKTGKISEVFSQISKLREKSLESQKQLKKAFRYPT
LVFLSIIGAFLFLMLFVVPNFKDLFENLGASLPFITHVMLEIYNFLDSYGIFCIFLFVVFIVMLILAYKNFHSFAFSCDF
LFLKIPLISRLIIYNQNYYFFMVFSLLLKNGISISKAFDLAIIGLENKFLIFQYKKLFSFIDSGLELSQAFKKIDIFDSL
VFSMLSVAMKSGRLEVLSEEIAKYYQQKSENLMDRFLVFLEPMMTLFVAFLVLFLALGIFLPMWELSSGVNFN
Nucleotide
Download Length: 1182 bp
>NTDB_id=1009053 ABHM94_RS07615 WP_002894094.1 1435142..1436323(-) (ctsF) [Campylobacter jejuni strain P8]
ATGAAATTTTATGAAGTAGAATTTCTTAAAAACAATCAAAATTATACAAAAACTATAAAAGCTGAAAATTTAAATATAGC
ACAAACAAAAGCCTTATCAAAGAATTGGAAAATCATTGATATAAAAGAAATTCAAAAATCTAATTTTCAGAGATTAAAGG
ATGAAAATTTCATACTCTTTTTTAAAGAGCTGGCTTTATTGTGTGAAGTTGGATTAAGTGTTCAAGAAGCGATTAAAGAA
TTATATCTTATGCATTCTTGCAAGATTATGAAAAAAATATTAGACAATTTAATTTTAGCCCAAAATCTAAATCAAGCTTT
TGAAAATGCTAATTTTGGATTAAATCGTGCGGAGCTAGCTTTGATAAAAACGGCTGAAAAGACAGGAAAAATCAGTGAAG
TGTTTAGTCAAATTTCTAAACTTCGAGAAAAAAGCTTAGAGAGTCAAAAACAATTGAAAAAGGCTTTTAGATATCCTACT
TTGGTTTTTTTAAGTATTATCGGAGCATTTTTGTTTTTAATGCTTTTTGTAGTGCCTAATTTTAAAGATTTATTTGAAAA
TTTAGGCGCGAGTTTGCCTTTTATCACGCATGTAATGTTAGAAATTTATAATTTTTTAGATAGCTATGGAATTTTTTGCA
TATTTTTGTTTGTTGTTTTTATTGTTATGCTTATTTTAGCTTATAAAAATTTTCATTCTTTTGCTTTTTCTTGCGATTTT
TTATTTTTAAAAATACCTTTGATTTCTCGTTTGATTATTTATAATCAAAATTATTATTTTTTTATGGTTTTTTCTTTGCT
TTTAAAAAATGGAATTTCAATATCTAAAGCTTTTGATTTAGCTATTATAGGGCTTGAAAATAAATTTTTAATTTTTCAGT
ATAAAAAACTTTTTAGTTTTATAGATTCTGGTCTTGAGTTAAGTCAGGCTTTTAAAAAGATTGATATTTTTGATTCTTTG
GTATTTTCTATGCTCAGTGTTGCGATGAAAAGTGGAAGACTTGAAGTGTTAAGTGAAGAAATTGCCAAATATTATCAACA
AAAAAGTGAAAATTTAATGGATAGATTTTTGGTTTTTTTAGAGCCTATGATGACTTTATTTGTGGCGTTTTTAGTTTTGT
TTTTGGCTTTAGGTATATTTTTACCTATGTGGGAGCTTAGCTCAGGGGTCAATTTTAACTAA
ATGAAATTTTATGAAGTAGAATTTCTTAAAAACAATCAAAATTATACAAAAACTATAAAAGCTGAAAATTTAAATATAGC
ACAAACAAAAGCCTTATCAAAGAATTGGAAAATCATTGATATAAAAGAAATTCAAAAATCTAATTTTCAGAGATTAAAGG
ATGAAAATTTCATACTCTTTTTTAAAGAGCTGGCTTTATTGTGTGAAGTTGGATTAAGTGTTCAAGAAGCGATTAAAGAA
TTATATCTTATGCATTCTTGCAAGATTATGAAAAAAATATTAGACAATTTAATTTTAGCCCAAAATCTAAATCAAGCTTT
TGAAAATGCTAATTTTGGATTAAATCGTGCGGAGCTAGCTTTGATAAAAACGGCTGAAAAGACAGGAAAAATCAGTGAAG
TGTTTAGTCAAATTTCTAAACTTCGAGAAAAAAGCTTAGAGAGTCAAAAACAATTGAAAAAGGCTTTTAGATATCCTACT
TTGGTTTTTTTAAGTATTATCGGAGCATTTTTGTTTTTAATGCTTTTTGTAGTGCCTAATTTTAAAGATTTATTTGAAAA
TTTAGGCGCGAGTTTGCCTTTTATCACGCATGTAATGTTAGAAATTTATAATTTTTTAGATAGCTATGGAATTTTTTGCA
TATTTTTGTTTGTTGTTTTTATTGTTATGCTTATTTTAGCTTATAAAAATTTTCATTCTTTTGCTTTTTCTTGCGATTTT
TTATTTTTAAAAATACCTTTGATTTCTCGTTTGATTATTTATAATCAAAATTATTATTTTTTTATGGTTTTTTCTTTGCT
TTTAAAAAATGGAATTTCAATATCTAAAGCTTTTGATTTAGCTATTATAGGGCTTGAAAATAAATTTTTAATTTTTCAGT
ATAAAAAACTTTTTAGTTTTATAGATTCTGGTCTTGAGTTAAGTCAGGCTTTTAAAAAGATTGATATTTTTGATTCTTTG
GTATTTTCTATGCTCAGTGTTGCGATGAAAAGTGGAAGACTTGAAGTGTTAAGTGAAGAAATTGCCAAATATTATCAACA
AAAAAGTGAAAATTTAATGGATAGATTTTTGGTTTTTTTAGAGCCTATGATGACTTTATTTGTGGCGTTTTTAGTTTTGT
TTTTGGCTTTAGGTATATTTTTACCTATGTGGGAGCTTAGCTCAGGGGTCAATTTTAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsF | Campylobacter jejuni subsp. jejuni 81-176 |
97.959 |
99.746 |
0.977 |