Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ABNP43_RS05270 Genome accession   NZ_CP157878
Coordinates   1045649..1046599 (+) Length   316 a.a.
NCBI ID   WP_017366964.1    Uniprot ID   A0A9X0FWU4
Organism   Bacillus altitudinis strain SCu11     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1040649..1051599
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABNP43_RS05250 (ABNP43_05245) - 1041884..1042366 (+) 483 WP_349925623.1 hypothetical protein -
  ABNP43_RS05255 (ABNP43_05250) - 1042397..1043836 (-) 1440 WP_169476044.1 PLP-dependent aminotransferase family protein -
  ABNP43_RS05260 (ABNP43_05255) - 1043980..1045149 (+) 1170 WP_017360232.1 MFS transporter -
  ABNP43_RS05265 (ABNP43_05260) - 1045212..1045490 (+) 279 WP_255836055.1 barstar family protein -
  ABNP43_RS05270 (ABNP43_05265) ceuB 1045649..1046599 (+) 951 WP_017366964.1 ABC transporter permease Machinery gene
  ABNP43_RS05275 (ABNP43_05270) - 1046592..1047542 (+) 951 WP_349925627.1 iron chelate uptake ABC transporter family permease subunit -
  ABNP43_RS05280 (ABNP43_05275) - 1047533..1048291 (+) 759 WP_349925628.1 ATP-binding cassette domain-containing protein -
  ABNP43_RS05285 (ABNP43_05280) - 1048314..1049258 (+) 945 WP_191218909.1 siderophore ABC transporter substrate-binding protein -
  ABNP43_RS05290 (ABNP43_05285) - 1049398..1050354 (+) 957 WP_048001719.1 LCP family protein -
  ABNP43_RS05295 (ABNP43_05290) - 1050587..1051021 (-) 435 WP_035700181.1 hypothetical protein -
  ABNP43_RS05300 (ABNP43_05295) - 1051107..1051469 (-) 363 WP_008348633.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34945.28 Da        Isoelectric Point: 9.7475

>NTDB_id=1008801 ABNP43_RS05270 WP_017366964.1 1045649..1046599(+) (ceuB) [Bacillus altitudinis strain SCu11]
MKLYQLSLLFVCLACASLFVGVQDLSLLQLFHLSDEQMNTLFSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILTAMLVFTQASPLMKMAIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=1008801 ABNP43_RS05270 WP_017366964.1 1045649..1046599(+) (ceuB) [Bacillus altitudinis strain SCu11]
ATGAAGTTGTACCAATTAAGTTTGTTGTTTGTGTGTTTGGCATGTGCGTCGCTGTTTGTCGGAGTACAGGACCTGTCTCT
TTTACAGTTGTTTCATCTATCAGATGAACAAATGAACACCTTATTTTCAAGTCGCATCCCGCGGCTGATGAGTATTGTGC
TTGCTGGCATGAGCCTGAGCTTATGCGGTTTTATCATGCAAAGCATGACGAGAAATAAATTTGTCTCTCCAACGACTGCA
GGAACAATGGATTGGGCCAAGCTGGGTATTTTAACCGCCATGCTTGTTTTTACACAGGCAAGCCCGCTGATGAAAATGGC
GATTGCGTTTTTATTTACGTTAGCTGGCAATCTATTATTCTTAAAAATTTTACGCCATATTAAGGTGAACGATACGATCT
ACGTACCGTTAGTCGGCTTAATGTTTGGCGGAATTGTCAGTTCAATTTCCACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTGCAAGGGGATTTTTCTCTTATTGTTCAGGGACGTTATGAACTGCTCTATGTGAGTGTTCC
TCTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCTGGTATGGGTGAGAGCTTTGCCGTCAATTTAGGTT
TAACGTATAAACGTGTCATGGCAGTTGGTTTGGTGATTGTTTCGATGATTACTTCTGTAACGATTTTGACTGTTGGCATG
CTGCCATTCCTTGGCTTAATCATTCCGAATATTGTATCGATCTACCGAGGGGATCACTTGAAAAAGAGCCTGCCGCATAC
GGCTTTATTAGGGGCCATTTTTGTGCTCATATGTGACGTACTCGGACGGGTGATCATTTATCCATATGAAATATCTGTCG
GGCTTATGGTCGGCATCATTGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAGCGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52

94.937

0.494

Multiple sequence alignment