Detailed information
Bioinformatically predicted
Overview
| Name | comK | Type | Regulator |
| Locus tag | ABNP43_RS05240 | Genome accession | NZ_CP157878 |
| Coordinates | 1039670..1040248 (+) | Length | 192 a.a. |
| NCBI ID | WP_046526639.1 | Uniprot ID | A0A9X0FWV9 |
| Organism | Bacillus altitudinis strain SCu11 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1034670..1045248
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABNP43_RS05220 (ABNP43_05215) | - | 1035163..1036458 (-) | 1296 | WP_035700157.1 | globin-coupled sensor protein | - |
| ABNP43_RS05225 (ABNP43_05220) | - | 1036550..1038082 (-) | 1533 | WP_349925621.1 | FAD-dependent oxidoreductase | - |
| ABNP43_RS05230 (ABNP43_05225) | - | 1038225..1039085 (+) | 861 | WP_341041615.1 | SDR family oxidoreductase | - |
| ABNP43_RS05235 (ABNP43_05230) | - | 1039144..1039380 (-) | 237 | WP_008348804.1 | IDEAL domain-containing protein | - |
| ABNP43_RS05240 (ABNP43_05235) | comK | 1039670..1040248 (+) | 579 | WP_046526639.1 | competence protein ComK | Regulator |
| ABNP43_RS05245 (ABNP43_05240) | - | 1040392..1041497 (+) | 1106 | Protein_975 | D-TA family PLP-dependent enzyme | - |
| ABNP43_RS05250 (ABNP43_05245) | - | 1041884..1042366 (+) | 483 | WP_349925623.1 | hypothetical protein | - |
| ABNP43_RS05255 (ABNP43_05250) | - | 1042397..1043836 (-) | 1440 | WP_169476044.1 | PLP-dependent aminotransferase family protein | - |
| ABNP43_RS05260 (ABNP43_05255) | - | 1043980..1045149 (+) | 1170 | WP_017360232.1 | MFS transporter | - |
Sequence
Protein
Download Length: 192 a.a. Molecular weight: 22376.41 Da Isoelectric Point: 8.8031
>NTDB_id=1008800 ABNP43_RS05240 WP_046526639.1 1039670..1040248(+) (comK) [Bacillus altitudinis strain SCu11]
MSGISETPLDSYVINQTTMAVLPVEEGKRVYSRVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHIFQESSLGDTVVTFTNEQSVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNRY
MSGISETPLDSYVINQTTMAVLPVEEGKRVYSRVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHIFQESSLGDTVVTFTNEQSVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNRY
Nucleotide
Download Length: 579 bp
>NTDB_id=1008800 ABNP43_RS05240 WP_046526639.1 1039670..1040248(+) (comK) [Bacillus altitudinis strain SCu11]
GTGTCAGGAATTAGTGAAACACCATTAGATTCATACGTCATTAATCAAACAACAATGGCGGTCCTTCCGGTTGAAGAAGG
AAAACGTGTATATTCAAGAGTGATCGAAAGAGAGACAAGCTTTTATGTTGAATTAAAGCCGCTGCAAATTATAGAACGCA
GTTGCAGGTTCTTTGGCTCAAGCTATGCAGGCAGAAAAGCGGGAACATACGAAGTAACAGGAATATCTCATAAGCCTCCC
ATCGTGATTGACTCATCCAATCATCTGTATTTCTTCCCAACCTATTCATCCAACCGCCCTCAATGCGGATGGATCTCCCA
CAAATACATTCATATCTTTCAGGAATCATCCCTCGGAGACACGGTTGTTACTTTTACAAATGAGCAATCGGTCAAACTAG
ATGTCTCATATAAGTCATTTGAGAGTCAGGTACACCGAACAGCGTATCTCCGAACGAAATTTCAAGATCGACTTGATGGA
GGTCTTCCTAAGAAACAAGAATTTATGCTGTATCCAAAGGAACAGCAGCTCAACCTTGTGTATGATTTTATCTTAAGAGA
ACTTCGTAATCGTTATTAG
GTGTCAGGAATTAGTGAAACACCATTAGATTCATACGTCATTAATCAAACAACAATGGCGGTCCTTCCGGTTGAAGAAGG
AAAACGTGTATATTCAAGAGTGATCGAAAGAGAGACAAGCTTTTATGTTGAATTAAAGCCGCTGCAAATTATAGAACGCA
GTTGCAGGTTCTTTGGCTCAAGCTATGCAGGCAGAAAAGCGGGAACATACGAAGTAACAGGAATATCTCATAAGCCTCCC
ATCGTGATTGACTCATCCAATCATCTGTATTTCTTCCCAACCTATTCATCCAACCGCCCTCAATGCGGATGGATCTCCCA
CAAATACATTCATATCTTTCAGGAATCATCCCTCGGAGACACGGTTGTTACTTTTACAAATGAGCAATCGGTCAAACTAG
ATGTCTCATATAAGTCATTTGAGAGTCAGGTACACCGAACAGCGTATCTCCGAACGAAATTTCAAGATCGACTTGATGGA
GGTCTTCCTAAGAAACAAGAATTTATGCTGTATCCAAAGGAACAGCAGCTCAACCTTGTGTATGATTTTATCTTAAGAGA
ACTTCGTAATCGTTATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comK | Bacillus subtilis subsp. subtilis str. 168 |
60.938 |
100 |
0.609 |